ID Q219J6_RHOPB Unreviewed; 480 AA.
AC Q219J6;
DT 18-APR-2006, integrated into UniProtKB/TrEMBL.
DT 18-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD86940.1};
GN OrderedLocusNames=RPC_1378 {ECO:0000313|EMBL:ABD86940.1};
OS Rhodopseudomonas palustris (strain BisB18).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=316056 {ECO:0000313|EMBL:ABD86940.1};
RN [1] {ECO:0000313|EMBL:ABD86940.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BisB18 {ECO:0000313|EMBL:ABD86940.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S.,
RA Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris BisB18.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP000301; ABD86940.1; -; Genomic_DNA.
DR AlphaFoldDB; Q219J6; -.
DR STRING; 316056.RPC_1378; -.
DR KEGG; rpc:RPC_1378; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR HOGENOM; CLU_046383_0_0_5; -.
DR OrthoDB; 1123084at2; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..69
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 480 AA; 54619 MW; 71DA5B2D69C6C01E CRC64;
MAGDSGKKLF VGPRFRRIRQ QLGLSQTQMA EGLGISPSYI NLIERNQRPV TAQILLRLAE
TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THSLQRLYAA
YTEARRGETL AAQMADREEG TRFEANPIER VRDLIEANRN YFPEIEQAAE NLRDELNVPA
QDLFVSLSER LREQHSIVTR IMPVEVMRET LRRFDRHRRQ LLISELIDGP GRAFQIAFQI
GITEFGKTFD AIVNRAGAVD DTARRLYRIT LANYFAASVM MPYGAFHAAA ETLNYDVHVL
AQRFNAGFEQ VCHRLTTLQR PNARGVPFFL LRVDNAGNVS KRFSSGTFPF SKFGGTCPLW
TVHSTFDTPD RLLKQVIELP DGSRYFSIAQ MVRRPVMPHP QPQPRFAIGL GCEIRHAAKL
VYAAGMDLDK EEATPIGVNC RLCEREHCSQ RAEPPITRSL ILDENTRRAS SFAFSNAREL
//
