ID Q24QA0_DESHY Unreviewed; 756 AA.
AC Q24QA0;
DT 18-APR-2006, integrated into UniProtKB/TrEMBL.
DT 18-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 119.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN OrderedLocusNames=DSY4003 {ECO:0000313|EMBL:BAE85792.1};
OS Desulfitobacterium hafniense (strain Y51).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae;
OC Desulfitobacterium.
OX NCBI_TaxID=138119 {ECO:0000313|EMBL:BAE85792.1, ECO:0000313|Proteomes:UP000001946};
RN [1] {ECO:0000313|EMBL:BAE85792.1, ECO:0000313|Proteomes:UP000001946}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Y51 {ECO:0000313|EMBL:BAE85792.1,
RC ECO:0000313|Proteomes:UP000001946};
RX PubMed=16513756; DOI=10.1128/JB.188.6.2262-2274.2006;
RA Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K.,
RA Inatomi K., Furukawa K., Inui M., Yukawa H.;
RT "Complete genome sequence of the dehalorespiring bacterium
RT Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides
RT ethenogenes 195.";
RL J. Bacteriol. 188:2262-2274(2006).
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DR EMBL; AP008230; BAE85792.1; -; Genomic_DNA.
DR AlphaFoldDB; Q24QA0; -.
DR STRING; 138119.DSY4003; -.
DR KEGG; dsy:DSY4003; -.
DR eggNOG; COG2203; Bacteria.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_8_4_9; -.
DR Proteomes; UP000001946; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001946};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 460..690
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT REGION 425..454
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 756 AA; 84541 MW; 48AD53E18EFEE51C CRC64;
MRIALNRLGR TIMRDELFES FPFGIIRIDS ANKIQRMNYY AKQLTHALDQ ESLETLLTLK
PKNDITTWSV ANHQIALNVE LFMVSGDSNR LLLLGLEPNF TSSLPPQFER ALEDLTTDPE
EIVLRIVTMI SEATSFERFD LVRVNPQLRK YSYAYSIGLE IEGSIYAPYS QIRKTGLGWI
LETEAPQLSS SLQPEGFSFS EDPMLYRTGF RSALRVPILF GHEVIGAILL GGTKALQFEI
EDAYLISQIS RHFSQAFYHS GIIQERSYQA MATSAFLHSM AENLKDDHIL DFLNDYCIQL
QIATQLESIY LCLLDQTHQQ QKLLVSAGRK FPQKNEWKPL DKEIAAMLQA KSIVCYSLVH
TSIQNTDELL NQGFTSTLYA PIEHRETIVA ALVAAAMDEK ASSPYMSGLF KVATEQLSSV
VARLPNAPGA VPEPNSSRQL PKPTRKDRLQ DQETSGFSRI IGSSRIMQDT LQNAARAAQY
DFPILITGET GTGKELLAKA IHQSSQVAQG PFIVVNSAAI PANLLESELF GYQEGAFSGG
VKGGKPGKIL LANRGTLFLD EIGELSPELQ AKLLRVIQEQ EIEPLGAIKP IPIKVRILSA
THRDLSSMVE QGEFREDLLY RLNSIEIKIP PLRERGQDIL ELAEHMLQFL AQSHDTPEKT
LSPGAQDLFL KYTWPGNIRQ LQNIINRLYV FAEGSTIHTQ DLPPDLRVAE TDKGHSEKEE
IAGLLAEFGG NKTALAQYLG ITRTGLWKKL KRLGLQ
//
