ID Q28BL9_XENTR Unreviewed; 480 AA.
AC Q28BL9; F6XF90; F7AVZ0;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 105.
DE SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 {ECO:0000313|RefSeq:NP_001039267.1};
DE SubName: Full=SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 2 {ECO:0000313|EMBL:CAJ81665.1, ECO:0000313|Ensembl:ENSXETP00000031141};
GN Name=smarcd2 {ECO:0000313|EMBL:CAJ81665.1,
GN ECO:0000313|Ensembl:ENSXETP00000031141,
GN ECO:0000313|RefSeq:NP_001039267.1,
GN ECO:0000313|Xenbase:XB-GENE-489103};
GN Synonyms=baf60b {ECO:0000313|RefSeq:NP_001039267.1}, cracd2
GN {ECO:0000313|RefSeq:NP_001039267.1}, pro2451
GN {ECO:0000313|RefSeq:NP_001039267.1}, rsc6p
GN {ECO:0000313|RefSeq:NP_001039267.1};
GN ORFNames=TEgg100m18.1-001 {ECO:0000313|EMBL:CAJ81665.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|EMBL:CAJ81665.1};
RN [1] {ECO:0000313|EMBL:CAJ81665.1}
RP NUCLEOTIDE SEQUENCE.
RA Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K.,
RA Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V.,
RA McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J.,
RA Zorn A.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSXETP00000031141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000031141};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L.,
RA Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R.,
RA Gerhard D.S., Goodstein D., Graves T., Grigoriev I.V., Grimwood J.,
RA Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H.,
RA Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K.,
RA Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A.,
RA Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T.,
RA Khokha M.K., Richardson P.M., Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [3] {ECO:0000313|Ensembl:ENSXETP00000031141}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
RN [4] {ECO:0000313|RefSeq:NP_001039267.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SMARCD family.
CC {ECO:0000256|ARBA:ARBA00010619}.
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DR EMBL; CR942769; CAJ81665.1; -; mRNA.
DR RefSeq; NP_001039267.1; NM_001045802.1.
DR RefSeq; XP_012807995.1; XM_012952541.2.
DR PaxDb; 8364-ENSXETP00000031141; -.
DR Ensembl; ENSXETT00000031141; ENSXETP00000031141; ENSXETG00000014231.
DR GeneID; 734143; -.
DR KEGG; xtr:734143; -.
DR AGR; Xenbase:XB-GENE-489103; -.
DR CTD; 6603; -.
DR Xenbase; XB-GENE-489103; smarcd2.
DR eggNOG; KOG2570; Eukaryota.
DR HOGENOM; CLU_023529_0_2_1; -.
DR OMA; MPTQRRG; -.
DR OrthoDB; 9355at2759; -.
DR TreeFam; TF106486; -.
DR Proteomes; UP000008143; Chromosome 10.
DR Bgee; ENSXETG00000014231; Expressed in gastrula and 14 other cell types or tissues.
DR GO; GO:0016514; C:SWI/SNF complex; IEA:UniProt.
DR CDD; cd17675; SWIB_BAF60B; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR InterPro; IPR030090; SMARCD2_SWIB_dom.
DR InterPro; IPR019835; SWIB_domain.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR PANTHER; PTHR13844; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D; 1.
DR PANTHER; PTHR13844:SF2; SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D MEMBER 2; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00151; SWIB; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000008143}.
FT DOMAIN 255..332
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 480 AA; 55569 MW; D630CF68748E25E2 CRC64;
MTSRGGLPLP SGSPMNMMRG PNPGAYRPPM GPYQRPGMLP GSRMPMPGMH MGSPMLPPYG
GGSPMRPAMN PMIMEPFRKR LLTPSGHPGP SHRRGVKRRK MADKILPQRI RELVPESQAY
MDLLAFERKL DQTIARKRME IQEAIKKPLT QKRKLRIYIS NTYTPAKPDG EESERVSSWE
LRVEGKLLED PSKQKRKFSS FFKSLVIELD KDLYGPDNHL VEWHRMATTQ ETDGFQVKRP
GDVNVKCTLL LMLDHQPPQY KLDPRLARLL GVHTQTRANI MQALWLYIKT NKLQDSHEKE
HINCNRYFRQ IFNCMRMKFS DIPMKLAGLL QHPDPIIINH TISVDPNDQK KTACYDIEVE
VDDPLKGQMS NFLASTTNQQ EIANLDSKIH ETIESINTLK TQRDFMLSFS NDPQEFIQDW
LKSQSRDLKI MTDTMGNPEE ERHTEFYQQP WAQEAVGRHI FFKVQQRRQE LEQVLGLRLT
//