ID Q28MZ3_JANSC Unreviewed; 582 AA.
AC Q28MZ3;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 86.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN OrderedLocusNames=Jann_3002 {ECO:0000313|EMBL:ABD55919.1};
OS Jannaschia sp. (strain CCS1).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Jannaschia.
OX NCBI_TaxID=290400 {ECO:0000313|EMBL:ABD55919.1, ECO:0000313|Proteomes:UP000008326};
RN [1] {ECO:0000313|Proteomes:UP000008326}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCS1 {ECO:0000313|Proteomes:UP000008326};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D.,
RA Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J.,
RA Larimer F., Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W.,
RA Buchan A., Gonzalez J.M., Schell M.A., Richardson P.;
RT "Complete sequence of chromosome of Jannaschia sp. CCS1.";
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABD55919.1, ECO:0000313|Proteomes:UP000008326}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCS1 {ECO:0000313|EMBL:ABD55919.1,
RC ECO:0000313|Proteomes:UP000008326};
RX PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA Saunders E., Buchan A.;
RT "Ecological genomics of marine Roseobacters.";
RL Appl. Environ. Microbiol. 73:4559-4569(2007).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
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DR EMBL; CP000264; ABD55919.1; -; Genomic_DNA.
DR RefSeq; WP_011456123.1; NC_007802.1.
DR AlphaFoldDB; Q28MZ3; -.
DR STRING; 290400.Jann_3002; -.
DR KEGG; jan:Jann_3002; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_1_5; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000008326; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ABD55919.1};
KW Hydrolase {ECO:0000313|EMBL:ABD55919.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000008326}.
FT DOMAIN 92..241
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 329..452
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 469..576
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 582 AA; 61395 MW; 43C7E02A311620B3 CRC64;
MSVSFLGVEA SLTGRRWIGP SDDVERLAQT LIQRADLDPA VAAILARRGV QPDDVASFLA
PALRDLLPDP MSLKDMAPAA TRLVEAARKG KRIAIFADYD VDGGSSAALL IWWLRALGRQ
ATLYIPDRID EGYGPNDEAM AALARGHDLI ICVDCGTLSH GPIAAAKGAD VMVLDHHLAT
AELPECVAVV NPNRQDEDGA SGHLCAAGVV FLVLVDANRR MREAGEQGPD LMGLLDLVAL
ATVADVAPLI GVNRALVVQG LKVMARRQRP GLVALSDVGR LDRAPTSYHL GFVLGPRVNA
GGRIGAADLG ARCLSTDDMA EAVKLAAQLD TLNTDRREIE QRVREAALVQ AEARGLEAPL
VWAAEDGWHP GVVGIVASRL KDHTRRPAIV IGFDGDDGKG SGRSMAGVDL GASIQKLAAE
GLIQKGGGHK MAAGLSLSRA QLEPAMERLT ELLAKQGAGT GGPADLRLDG TIMTSAATPE
LIEKIEAAGP YGAGAPAPRF ALPALRIRHT RPVGETHLKL TLGDGGPVTI DAICFDAVRS
GLDELQAHNG RSVHVAGRVE LNHWQGRTRV QLRLDDAAWA DE
//
