ID Q28P45_JANSC Unreviewed; 978 AA.
AC Q28P45;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABD55517.1};
GN OrderedLocusNames=Jann_2600 {ECO:0000313|EMBL:ABD55517.1};
OS Jannaschia sp. (strain CCS1).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Jannaschia.
OX NCBI_TaxID=290400 {ECO:0000313|EMBL:ABD55517.1, ECO:0000313|Proteomes:UP000008326};
RN [1] {ECO:0000313|Proteomes:UP000008326}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCS1 {ECO:0000313|Proteomes:UP000008326};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D.,
RA Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J.,
RA Larimer F., Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W.,
RA Buchan A., Gonzalez J.M., Schell M.A., Richardson P.;
RT "Complete sequence of chromosome of Jannaschia sp. CCS1.";
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABD55517.1, ECO:0000313|Proteomes:UP000008326}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCS1 {ECO:0000313|EMBL:ABD55517.1,
RC ECO:0000313|Proteomes:UP000008326};
RX PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA Saunders E., Buchan A.;
RT "Ecological genomics of marine Roseobacters.";
RL Appl. Environ. Microbiol. 73:4559-4569(2007).
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DR EMBL; CP000264; ABD55517.1; -; Genomic_DNA.
DR AlphaFoldDB; Q28P45; -.
DR STRING; 290400.Jann_2600; -.
DR KEGG; jan:Jann_2600; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_20_5; -.
DR OrthoDB; 9814202at2; -.
DR Proteomes; UP000008326; Chromosome.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000008326}.
FT DOMAIN 40..68
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 88..140
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 570..701
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 710..961
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 515..542
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 978 AA; 108723 MW; BDD0656F69EF5C96 CRC64;
MAAEVTMSIE ILKTNFMELT SDAVVVGYVA PGERVAVLKY VNAAFTAQFG YAPDDILGKT
AATLHDEEDW AGFKSTVDGH IAAHRTQFST DAKMVRADGS RFWASASLIV VENEDEGGRY
VCATFRDISN LKEAETTAQN AHGRLISALN AYPDPIVIYD KDLLLVCWND AYAIQMTGRA
EGLQVGMHLK DVLRRCAFHG QVAEAKGREE AWIAQTMSPE NLAVVAQDIE MEGDIHQRLM
RSRASNGDYV VFRLDTTEMV RQRRASEAAR SRLLAALNTY PAPFAIYDAD DRLVVWNNAY
AASMAKDIAN IQVGLHRRDV AAIAVRDGIL AEAVGNETEW ISKEHQEADL AKPVQDLELA
GDIHHRLLRS RAENGDLVML RIDTTEIVRH RRALEKTQDR LISAINAYPD PFAIYDRDQN
LVIWNPAYAQ SMTDDPDSLY PGISLKELLL GAARCGRIPV SGMSIEDWVE EYYSEDLLKP
GAEDFEFVGD THFRMVRSRA ENEEHVVLSL NITEVVRQRR AVEEYAKKLE KANAAITRQA
QRDELTGLGN RRYLGLKFDA FVARRARNGG EIAALHIDLD RFKQINDTMG HAAGDKVLLE
TSKRVQRLIG PDDVVARIGG DEFVVLIYEP TVSQRPETLT GVLLDALSRP TQFEGRECRF
GASIGLARTP LSGVDELLTN SDVALYKAKR RGRSQVSSFD RSDLEELRCN KTLADDILRG
IEGGEFVPFY QPQVDAKTGR VLGLEALARW DHPQKGVLAP SHFLQIATDL NVAADIDRMI
FEAAIDECSN TFQALGQPPT LSFNVSARRV SDDNIQDIAG RVRQYPGQVC FELLETIFLE
EEGDEFLNQL DRLRELGIGL EVDDFGSGRA SVIALQRIAP DRLKIDRRLV APIAHCAKGV
RLLRSIVEIG LSLEMGVTAE GVETREQADI LAEFGCDRLQ GYLFAKPMGF ADMAAFMERS
QGLDDAATVA RLHKARRA
//
