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Database: UniProt
Entry: Q29A88_DROPS
LinkDB: Q29A88_DROPS
Original site: Q29A88_DROPS 
ID   Q29A88_DROPS            Unreviewed;      2127 AA.
AC   Q29A88;
DT   04-APR-2006, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 3.
DT   05-JUN-2019, entry version 79.
DE   SubName: Full=Uncharacterized protein, isoform A {ECO:0000313|EMBL:EAL27462.3};
GN   Name=Dpse\GA16078 {ECO:0000313|EMBL:EAL27462.3};
GN   ORFNames=Dpse_GA16078 {ECO:0000313|EMBL:EAL27462.3}, GA16078
GN   {ECO:0000313|FlyBase:FBgn0076094};
OS   Drosophila pseudoobscura pseudoobscura (Fruit fly).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
OC   Ephydroidea; Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=46245 {ECO:0000313|EMBL:EAL27462.3, ECO:0000313|Proteomes:UP000001819};
RN   [1] {ECO:0000313|EMBL:EAL27462.3, ECO:0000313|Proteomes:UP000001819}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MV2-25 / Tucson 14011-0121.94
RC   {ECO:0000313|Proteomes:UP000001819};
RX   PubMed=15632085; DOI=10.1101/gr.3059305;
RA   Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S.,
RA   Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P.,
RA   Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J.,
RA   van Batenburg M.F., Howells S.L., Scherer S.E., Sodergren E.,
RA   Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D.,
RA   Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D.,
RA   Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R.,
RA   Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L.,
RA   Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.,
RA   Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.,
RA   Weinstock G.M., Gibbs R.A.;
RT   "Comparative genome sequencing of Drosophila pseudoobscura:
RT   chromosomal, gene, and cis-element evolution.";
RL   Genome Res. 15:1-18(2005).
RN   [2] {ECO:0000313|EMBL:EAL27462.3, ECO:0000313|Proteomes:UP000001819}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MV2-25 / Tucson 14011-0121.94
RC   {ECO:0000313|Proteomes:UP000001819};
RX   PubMed=17994087; DOI=10.1038/nature06341;
RG   Drosophila 12 Genomes Consortium;
RA   Clark A.G., Eisen M.B., Smith D.R., Bergman C.M., Oliver B.,
RA   Markow T.A., Kaufman T.C., Kellis M., Gelbart W., Iyer V.N.,
RA   Pollard D.A., Sackton T.B., Larracuente A.M., Singh N.D., Abad J.P.,
RA   Abt D.N., Adryan B., Aguade M., Akashi H., Anderson W.W.,
RA   Aquadro C.F., Ardell D.H., Arguello R., Artieri C.G., Barbash D.A.,
RA   Barker D., Barsanti P., Batterham P., Batzoglou S., Begun D.,
RA   Bhutkar A., Blanco E., Bosak S.A., Bradley R.K., Brand A.D.,
RA   Brent M.R., Brooks A.N., Brown R.H., Butlin R.K., Caggese C.,
RA   Calvi B.R., Bernardo de Carvalho A., Caspi A., Castrezana S.,
RA   Celniker S.E., Chang J.L., Chapple C., Chatterji S., Chinwalla A.,
RA   Civetta A., Clifton S.W., Comeron J.M., Costello J.C., Coyne J.A.,
RA   Daub J., David R.G., Delcher A.L., Delehaunty K., Do C.B., Ebling H.,
RA   Edwards K., Eickbush T., Evans J.D., Filipski A., Findeiss S.,
RA   Freyhult E., Fulton L., Fulton R., Garcia A.C., Gardiner A.,
RA   Garfield D.A., Garvin B.E., Gibson G., Gilbert D., Gnerre S.,
RA   Godfrey J., Good R., Gotea V., Gravely B., Greenberg A.J.,
RA   Griffiths-Jones S., Gross S., Guigo R., Gustafson E.A., Haerty W.,
RA   Hahn M.W., Halligan D.L., Halpern A.L., Halter G.M., Han M.V.,
RA   Heger A., Hillier L., Hinrichs A.S., Holmes I., Hoskins R.A.,
RA   Hubisz M.J., Hultmark D., Huntley M.A., Jaffe D.B., Jagadeeshan S.,
RA   Jeck W.R., Johnson J., Jones C.D., Jordan W.C., Karpen G.H.,
RA   Kataoka E., Keightley P.D., Kheradpour P., Kirkness E.F.,
RA   Koerich L.B., Kristiansen K., Kudrna D., Kulathinal R.J., Kumar S.,
RA   Kwok R., Lander E., Langley C.H., Lapoint R., Lazzaro B.P., Lee S.J.,
RA   Levesque L., Li R., Lin C.F., Lin M.F., Lindblad-Toh K., Llopart A.,
RA   Long M., Low L., Lozovsky E., Lu J., Luo M., Machado C.A.,
RA   Makalowski W., Marzo M., Matsuda M., Matzkin L., McAllister B.,
RA   McBride C.S., McKernan B., McKernan K., Mendez-Lago M., Minx P.,
RA   Mollenhauer M.U., Montooth K., Mount S.M., Mu X., Myers E., Negre B.,
RA   Newfeld S., Nielsen R., Noor M.A., O'Grady P., Pachter L.,
RA   Papaceit M., Parisi M.J., Parisi M., Parts L., Pedersen J.S.,
RA   Pesole G., Phillippy A.M., Ponting C.P., Pop M., Porcelli D.,
RA   Powell J.R., Prohaska S., Pruitt K., Puig M., Quesneville H.,
RA   Ram K.R., Rand D., Rasmussen M.D., Reed L.K., Reenan R., Reily A.,
RA   Remington K.A., Rieger T.T., Ritchie M.G., Robin C., Rogers Y.H.,
RA   Rohde C., Rozas J., Rubenfield M.J., Ruiz A., Russo S., Salzberg S.L.,
RA   Sanchez-Gracia A., Saranga D.J., Sato H., Schaeffer S.W., Schatz M.C.,
RA   Schlenke T., Schwartz R., Segarra C., Singh R.S., Sirot L., Sirota M.,
RA   Sisneros N.B., Smith C.D., Smith T.F., Spieth J., Stage D.E.,
RA   Stark A., Stephan W., Strausberg R.L., Strempel S., Sturgill D.,
RA   Sutton G., Sutton G.G., Tao W., Teichmann S., Tobari Y.N.,
RA   Tomimura Y., Tsolas J.M., Valente V.L., Venter E., Venter J.C.,
RA   Vicario S., Vieira F.G., Vilella A.J., Villasante A., Walenz B.,
RA   Wang J., Wasserman M., Watts T., Wilson D., Wilson R.K., Wing R.A.,
RA   Wolfner M.F., Wong A., Wong G.K., Wu C.I., Wu G., Yamamoto D.,
RA   Yang H.P., Yang S.P., Yorke J.A., Yoshida K., Zdobnov E., Zhang P.,
RA   Zhang Y., Zimin A.V., Baldwin J., Abdouelleil A., Abdulkadir J.,
RA   Abebe A., Abera B., Abreu J., Acer S.C., Aftuck L., Alexander A.,
RA   An P., Anderson E., Anderson S., Arachi H., Azer M., Bachantsang P.,
RA   Barry A., Bayul T., Berlin A., Bessette D., Bloom T., Blye J.,
RA   Boguslavskiy L., Bonnet C., Boukhgalter B., Bourzgui I., Brown A.,
RA   Cahill P., Channer S., Cheshatsang Y., Chuda L., Citroen M.,
RA   Collymore A., Cooke P., Costello M., D'Aco K., Daza R., De Haan G.,
RA   DeGray S., DeMaso C., Dhargay N., Dooley K., Dooley E., Doricent M.,
RA   Dorje P., Dorjee K., Dupes A., Elong R., Falk J., Farina A., Faro S.,
RA   Ferguson D., Fisher S., Foley C.D., Franke A., Friedrich D.,
RA   Gadbois L., Gearin G., Gearin C.R., Giannoukos G., Goode T.,
RA   Graham J., Grandbois E., Grewal S., Gyaltsen K., Hafez N., Hagos B.,
RA   Hall J., Henson C., Hollinger A., Honan T., Huard M.D., Hughes L.,
RA   Hurhula B., Husby M.E., Kamat A., Kanga B., Kashin S., Khazanovich D.,
RA   Kisner P., Lance K., Lara M., Lee W., Lennon N., Letendre F.,
RA   LeVine R., Lipovsky A., Liu X., Liu J., Liu S., Lokyitsang T.,
RA   Lokyitsang Y., Lubonja R., Lui A., MacDonald P., Magnisalis V.,
RA   Maru K., Matthews C., McCusker W., McDonough S., Mehta T., Meldrim J.,
RA   Meneus L., Mihai O., Mihalev A., Mihova T., Mittelman R., Mlenga V.,
RA   Montmayeur A., Mulrain L., Navidi A., Naylor J., Negash T., Nguyen T.,
RA   Nguyen N., Nicol R., Norbu C., Norbu N., Novod N., O'Neill B.,
RA   Osman S., Markiewicz E., Oyono O.L., Patti C., Phunkhang P.,
RA   Pierre F., Priest M., Raghuraman S., Rege F., Reyes R., Rise C.,
RA   Rogov P., Ross K., Ryan E., Settipalli S., Shea T., Sherpa N., Shi L.,
RA   Shih D., Sparrow T., Spaulding J., Stalker J., Stange-Thomann N.,
RA   Stavropoulos S., Stone C., Strader C., Tesfaye S., Thomson T.,
RA   Thoulutsang Y., Thoulutsang D., Topham K., Topping I., Tsamla T.,
RA   Vassiliev H., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J.,
RA   Wilson A., Yadav S., Young G., Yu Q., Zembek L., Zhong D., Zimmer A.,
RA   Zwirko Z., Jaffe D.B., Alvarez P., Brockman W., Butler J., Chin C.,
RA   Gnerre S., Grabherr M., Kleber M., Mauceli E., MacCallum I.;
RT   "Evolution of genes and genomes on the Drosophila phylogeny.";
RL   Nature 450:203-218(2007).
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DR   EMBL; CM000070; EAL27462.3; -; Genomic_DNA.
DR   RefSeq; XP_001358324.3; XM_001358287.3.
DR   STRING; 7237.FBpp0283624; -.
DR   EnsemblMetazoa; FBtr0285186; FBpp0283624; FBgn0076094.
DR   GeneID; 4801195; -.
DR   KEGG; dpo:Dpse_GA16078; -.
DR   FlyBase; FBgn0076094; Dpse\GA16078.
DR   InParanoid; Q29A88; -.
DR   Proteomes; UP000001819; Chromosome 2.
DR   Bgee; FBgn0076094; Expressed in 3 organ(s), highest expression level in head.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   CDD; cd00063; FN3; 6.
DR   Gene3D; 2.60.40.10; -; 16.
DR   InterPro; IPR003961; FN3_dom.
DR   InterPro; IPR036116; FN3_sf.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR013098; Ig_I-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   Pfam; PF00041; fn3; 5.
DR   Pfam; PF07679; I-set; 5.
DR   SMART; SM00060; FN3; 6.
DR   SMART; SM00409; IG; 10.
DR   SMART; SM00408; IGc2; 9.
DR   SUPFAM; SSF48726; SSF48726; 10.
DR   SUPFAM; SSF49265; SSF49265; 4.
DR   PROSITE; PS50853; FN3; 6.
DR   PROSITE; PS50835; IG_LIKE; 9.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001819};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001819};
KW   Repeat {ECO:0000256|SAAS:SAAS00923712};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     64     85       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1720   1741       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       82    186       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      301    391       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      396    488       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      494    590       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      594    684       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      688    778       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      783    869       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      873    955       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      974   1092       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1097   1201       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1206   1303       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1307   1406       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1393   1493       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN     1496   1589       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1593   1696       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   REGION     1887   1980       Disordered. {ECO:0000256|MobiDB-lite:
FT                                Q29A88}.
FT   REGION     1993   2028       Disordered. {ECO:0000256|MobiDB-lite:
FT                                Q29A88}.
FT   REGION     2054   2077       Disordered. {ECO:0000256|MobiDB-lite:
FT                                Q29A88}.
FT   COILED     2102   2122       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS   1887   1940       Polar. {ECO:0000256|MobiDB-lite:Q29A88}.
FT   COMPBIAS   1955   1970       Polar. {ECO:0000256|MobiDB-lite:Q29A88}.
FT   COMPBIAS   2001   2028       Polar. {ECO:0000256|MobiDB-lite:Q29A88}.
SQ   SEQUENCE   2127 AA;  233543 MW;  3AFDB9F655F4D308 CRC64;
     MIRAEAAGSN AGSRQQRTIA GFSHCRRFEL FGRVHRTKSE IVASEFTCNE MSLLELLLQA
     KSKALTATAL GLLLLLVFLP LPPVLATSGL RVPTFLLEPA PRLLFGNDTG AQVSCTAHGH
     PPPVVSWVLR DGTLATQVPG LRKISGNGTL HFPPFLAQYY RTDVHEATYR CKASNEAGTI
     LSRNVQVQAV VRRQFHVHVE NTEVYLGNSA LIKCAIPEYV RPYVRVASWH RGEEILLPDL
     SDVAGRYVVL AASGDLYVRS VRSEDGLMKF SCLVTNTLNG ERQRSDAVML QVKELSKNLA
     PRTTQKPVME IHVERGNDVH LPCNIQGNPF PIFTWYRVSD SAALYPIPSS QRVILSRTLL
     LIKNADERDA GKWICQASNQ FGEQRIEIRL SVNSYVSVHI LPQVQIVNSG GTANFNCTTT
     GSAIDAIDWL HNGKPLQANN ALTTGRDNIR FLSKSSLLVQ NVGRRDRGVY QCLVENQRAS
     AQAMAELKLG DTVPELIYTF IEQNVRPGPL ISLKCSASGS PPPQFSWMLD SQPIIDVSLH
     HRFAIGQFVD MSGDVISHLN ISHVRPDDGG LYRCVATNSM GSVQHSARLN VYGPPYVRAI
     GPIKAVAGED IIVHCPFAGY PIEQIRWEKA HQELTTSTHF ELATVAEGGQ LVIKNVEPGR
     DQGIYTCIVR SRAGEEARRD MQLNVNSPPV IEPFKFPKNL QEGGRAQITC AVSSGDMPIY
     FSWKKDDSSI PSSLQITEKK EEFYSLLVFK DISAKHSGKY TCYAGNAAAK VNYTAELQVR
     VAPRWSYEPM DTAIMLGNTI SINCEAEGYP IPAITWFKGQ GKASKDFKPL SMRNHSLLLN
     LATDNDEGYY MCRATNEIGA GLKKIIRINV NEPARFEQPA RNISSRRNDP VTLDCHAKGD
     EPITIGWTHN NGRIDLNNFR FSIAEMKTDK GVDSQLTIGQ SDRHDSGVYR CVAENPYGRA
     EQIIFLAVQE RPDTPSNLEV FEVGSRTVKL SWRRPFDGNS PVLSYLVQYQ ALKYLQSHAA
     LGAAGGDWNG LNVINVSLPS TSISRSYDSD LRESAIVAGL TPATTFLIRM QAINEIERSA
     YTEAIVLKTQ EEAPTEAPSN VQVQTGGESE LIVTWQIPPR ESWNGELIGY TVNCTEEKQN
     INYISVVNSS LKSVIVSGWA TTKATLRNLR KYTRYSVTVR ALNSFGSGPW SAAIFGTTAE
     GVPEAAPQNV NCTALSSQSL KISWQEPPLQ FHGGIIQGYK ILYRPIVHQI DFPAKLEIKR
     TSNLETYLHT LHKASNYSLR VLAYTATGDG LASQPLYCQT DDDVPDAPAA IKAAALTADS
     ILISWLTPKN RNGIISHYTV YAREAGRKGQ AKTHMVRVDE NGYPVTFEAR SLAENQMYEF
     WVSASTSVGE GEPTSVVAQA TNTRAPARIA SFGQVVRKAV GTGLVLECLA VGNPTPRARW
     LTRDRPVTFS PFYEVTNEGN LKIHRVEGSL SGNYTCTANN LFGSDEIQYQ VIAMKPPGAP
     QIIVQYASAD SIRVSWDAPD DGGAPLQGYS ISHHTAGESW FSTELLPENN AYTITSLKCG
     NQYIIKMSAH NMVGSGVSSE EINVWTKGKA SQAPNGNELI ATNATCVNLK LSSWNNGGCG
     IHHFSIEHRP LGDIRWTVVT SDISNAEENR ENLIFCDFLP AKWYQLRISA TNDAGKTTEH
     YHFSTTSIDG ITIPPPSVFP SENDLMNNLI NATNPTSGDW FSTLIVIVII TVSIITIALT
     IKHRRTLCGP MAEGYESRAL PGDYKEDHEN RRNQQVYSAS PVKTVDKGNE SEMYEISPYA
     TFSVNGGRTG APAKTPTRAV AAQTPLDYTM QFKTFGHPEG ENLNATAYPL LPTSGFGHVK
     SKSSWHKQRY YNTDDESTLS KSMTIVAGSQ AGHSKKSSAG RSAKNAGSSV GVVAESESDT
     SISPSTEFSN MPTYRVPCKS SRSSDGRAVV DMFRPDSSTE SNNDQGSPAP ERRHNTPRHV
     LGLGVGVGVV GEKRSAGQRS RKHSAQPSNQ TLERRKCPGS SNSLDSEVDA ETAASLAASI
     AAMAGAGVDL TGGFRPPAGF HDGREFPSQD QSECEREQRA LDLEVQRVME STGDAQLAKM
     DREELTSLLA RYHEKKEQER QEYTIHV
//
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