ID Q2CFB6_OCEGH Unreviewed; 591 AA.
AC Q2CFB6;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=OG2516_15484 {ECO:0000313|EMBL:EAR51379.1};
OS Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /
OS HTCC2516).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Oceanicola.
OX NCBI_TaxID=314256 {ECO:0000313|EMBL:EAR51379.1, ECO:0000313|Proteomes:UP000003635};
RN [1] {ECO:0000313|EMBL:EAR51379.1, ECO:0000313|Proteomes:UP000003635}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-861 / DSM 15982 / KCTC 12143 / HTCC2516
RC {ECO:0000313|Proteomes:UP000003635};
RX PubMed=20418400; DOI=10.1128/JB.00412-10;
RA Thrash J.C., Cho J.C., Vergin K.L., Giovannoni S.J.;
RT "Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola
RT batsensis HTCC2597(TDelta).";
RL J. Bacteriol. 192:3549-3550(2010).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAR51379.1}.
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DR EMBL; AAOT01000013; EAR51379.1; -; Genomic_DNA.
DR RefSeq; WP_007256611.1; NZ_CH724108.1.
DR AlphaFoldDB; Q2CFB6; -.
DR STRING; 314256.OG2516_15484; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_1_5; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000003635; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EAR51379.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EAR51379.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000003635}.
FT DOMAIN 102..252
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 339..462
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 479..587
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT COILED 332..362
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 591 AA; 61711 MW; 89FDE469991FDFF2 CRC64;
MGLLQDIAPD AAEAFLSVAT SVTGRRWVGP APGADRLTEA LVQATGLADP VARVLVRLNV
APETATAYLS PALRDLLPDP LTLRDMHAAA ARFLQAVARN ERIAIFADYD VDGGASAALL
LTWLRAMGRR ATLYIPDRID EGYGPNVPAM RALAREHDLI VCVDCGTLSH EPVAAAEGAD
VVILDHHLGG ETLPAALAVV NPNRQDEDGA LGHLCAAAVV FLMLVEAGRQ LREQGAKGPN
LLEFLDLVAL ATVADVAPLI GVNRALVRQG LAVMAQRRRP GLVALADVAR LDTAPTSYTL
GYVFGPRVNA GGRIGAADLG ARLLATDDPH EAAALAQRLD ALNTERREIE AAVRDAALEQ
AEGRGLDGPL VWAAGEGWHP GVVGIVAARL KEATGRPAVV IGLDGDEGKG SGRSVGGIDL
GAAIHKVAGE GLLLKGGGHR MAAGLTVARD RLEPAMTRLS ELLARQGAGR LGPADLRLDG
LLMPGAATVE LCESLERCGP FGQGAPAPRF AFPGVRITQA REVGTGHLKV RFDDGFGGGI
DAIAFNALEG PMGQCLVQHG GARFHLAGRL EINVWQGRQR VQVKLEDAAP A
//
