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Database: UniProt
Entry: Q2FYQ5
LinkDB: Q2FYQ5
Original site: Q2FYQ5 
ID   NIKB_STAA8              Reviewed;         328 AA.
AC   Q2FYQ5; Q84AN7; Q9ZGN6;
DT   23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT   21-MAR-2006, sequence version 1.
DT   27-MAR-2024, entry version 97.
DE   RecName: Full=Nickel import system permease protein NikB {ECO:0000305};
GN   Name=nikB {ECO:0000303|PubMed:20662775}; Synonyms=opp-2B, oppB2;
GN   OrderedLocusNames=SAOUHSC_01380;
OS   Staphylococcus aureus (strain NCTC 8325 / PS 47).
OC   Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
OC   Staphylococcus.
OX   NCBI_TaxID=93061;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=9791183; DOI=10.1046/j.1365-2958.1998.01075.x;
RA   Coulter S.N., Schwan W.R., Ng E.Y.W., Langhorne M.H., Ritchie H.D.,
RA   Westbrock-Wadman S., Hufnagle W.O., Folger K.R., Bayer A.S., Stover C.K.;
RT   "Staphylococcus aureus genetic loci impacting growth and survival in
RT   multiple infection environments.";
RL   Mol. Microbiol. 30:393-404(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA   Cramton S.E., Madimidou F., Goetz F.;
RT   "Role of the oligopeptide permease (opp-2) operon in Staphylococcus aureus
RT   biofilm formation.";
RL   Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NCTC 8325 / PS 47;
RA   Gillaspy A.F., Worrell V., Orvis J., Roe B.A., Dyer D.W., Iandolo J.J.;
RT   "The Staphylococcus aureus NCTC 8325 genome.";
RL   (In) Fischetti V., Novick R., Ferretti J., Portnoy D., Rood J. (eds.);
RL   Gram positive pathogens, 2nd edition, pp.381-412, ASM Press, Washington
RL   D.C. (2006).
RN   [4]
RP   FUNCTION, SUBUNIT, INDUCTION, AND DISRUPTION PHENOTYPE.
RC   STRAIN=RN6390;
RX   PubMed=20662775; DOI=10.1111/j.1365-2958.2010.07287.x;
RA   Hiron A., Posteraro B., Carriere M., Remy L., Delporte C., La Sorda M.,
RA   Sanguinetti M., Juillard V., Borezee-Durant E.;
RT   "A nickel ABC-transporter of Staphylococcus aureus is involved in urinary
RT   tract infection.";
RL   Mol. Microbiol. 77:1246-1260(2010).
CC   -!- FUNCTION: Part of the ABC transporter complex NikABCDE (Opp2) involved
CC       in nickel import. Probably responsible for the translocation of the
CC       substrate across the membrane. Required for full urease activity and
CC       plays a significant role in the virulence of S.aureus during urinary
CC       tract infection (UTI). {ECO:0000269|PubMed:20662775}.
CC   -!- SUBUNIT: The complex is composed of two ATP-binding proteins (NikD and
CC       NikE), two transmembrane proteins (NikB and NikC) and a solute-binding
CC       protein (NikA). {ECO:0000269|PubMed:20662775}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC       protein {ECO:0000255}.
CC   -!- INDUCTION: Transcription is stable during the exponential phase and
CC       increases only in standard conditions in late exponential phase.
CC       {ECO:0000269|PubMed:20662775}.
CC   -!- DISRUPTION PHENOTYPE: Deletion of the nikBCDE operon strongly reduces
CC       nickel transport and urease activity. Mutant shows decreased virulence
CC       in a mouse model of ascending UTI. {ECO:0000269|PubMed:20662775}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport system
CC       permease family. OppBC subfamily. {ECO:0000305}.
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DR   EMBL; AF076684; AAC69843.1; -; Genomic_DNA.
DR   EMBL; AY205146; AAO47755.1; -; Genomic_DNA.
DR   EMBL; CP000253; ABD30475.1; -; Genomic_DNA.
DR   RefSeq; WP_000469949.1; NZ_LS483365.1.
DR   RefSeq; YP_499907.1; NC_007795.1.
DR   AlphaFoldDB; Q2FYQ5; -.
DR   SMR; Q2FYQ5; -.
DR   STRING; 93061.SAOUHSC_01380; -.
DR   PaxDb; 1280-SAXN108_1397; -.
DR   GeneID; 3920789; -.
DR   KEGG; sao:SAOUHSC_01380; -.
DR   PATRIC; fig|93061.5.peg.1264; -.
DR   eggNOG; COG0601; Bacteria.
DR   HOGENOM; CLU_036879_0_2_9; -.
DR   OrthoDB; 9773683at2; -.
DR   PRO; PR:Q2FYQ5; -.
DR   Proteomes; UP000008816; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015675; P:nickel cation transport; IEA:UniProtKB-KW.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; MetI-like; 1.
DR   InterPro; IPR045621; BPD_transp_1_N.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   PANTHER; PTHR43163; DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED; 1.
DR   PANTHER; PTHR43163:SF6; DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED; 1.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   Pfam; PF19300; BPD_transp_1_N; 1.
DR   SUPFAM; SSF161098; MetI-like; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   1: Evidence at protein level;
KW   Cell membrane; Ion transport; Membrane; Nickel; Nickel transport;
KW   Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT   CHAIN           1..328
FT                   /note="Nickel import system permease protein NikB"
FT                   /id="PRO_0000272185"
FT   TRANSMEM        11..31
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        104..124
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        139..159
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        170..190
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        229..249
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        279..299
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          100..297
FT                   /note="ABC transmembrane type-1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
SQ   SEQUENCE   328 AA;  36814 MW;  DF28C17B1DB7D871 CRC64;
     MFIIKSMLYR LMQMIVVLFV ISTLTFILMK LSPGNPVDKI LHLDVAQVST EQINATKDKL
     GLNDSLLVQW WHWMNHLLHF NLGKSFESKE PVTQILFNYA PITLLISFST LVVSLCISIP
     LGIIAAKRFH KWTDKVIRVI STLSISLPAF FIGIILLFIV TNLMNIDSVI LSQFILPVIT
     LSLGMCAYII RLVRSNLLML LQSNIVQASR LRGMNERYIL IHDLLKPTIL PIIPLLGISL
     GSLIGGTVVI ENLFDIPGIG YLLMDSIKSR DYPVIQGCVL FIGFFVVIIN TIADLLTLLL
     DPKQRLQLGN PKIKTNTPLI SESSDRHA
//
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