ID Q2JK72_SYNJB Unreviewed; 278 AA.
AC Q2JK72;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE SubName: Full=RNA polymerase sigma-70 domain protein {ECO:0000313|EMBL:ABD02923.1};
GN OrderedLocusNames=CYB_1974 {ECO:0000313|EMBL:ABD02923.1};
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321332 {ECO:0000313|EMBL:ABD02923.1, ECO:0000313|Proteomes:UP000001938};
RN [1] {ECO:0000313|EMBL:ABD02923.1, ECO:0000313|Proteomes:UP000001938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13) {ECO:0000313|Proteomes:UP000001938};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
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DR EMBL; CP000240; ABD02923.1; -; Genomic_DNA.
DR RefSeq; WP_011433562.1; NC_007776.1.
DR AlphaFoldDB; Q2JK72; -.
DR STRING; 321332.CYB_1974; -.
DR KEGG; cyb:CYB_1974; -.
DR eggNOG; ENOG5032KUH; Bacteria.
DR HOGENOM; CLU_1000886_0_0_3; -.
DR OrthoDB; 679904at2; -.
DR Proteomes; UP000001938; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR InterPro; IPR018764; Anti-sigma_K_RskA.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR PANTHER; PTHR37461; ANTI-SIGMA-K FACTOR RSKA; 1.
DR PANTHER; PTHR37461:SF1; ANTI-SIGMA-K FACTOR RSKA; 1.
DR Pfam; PF10099; RskA; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001938}.
FT DOMAIN 26..91
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
SQ SEQUENCE 278 AA; 31863 MW; 7CE31968B4F13C72 CRC64;
MAELTDFELM RQIQLRDRRS HFLLKDRYQK RLLDIALAIL KQPHQAEEVV RQVFEFCWKH
ANAFDLQRDR SVALWLYELT AFQARERLRR WAWLPAPLSI QTSAPLWPQR LLWGSLAVLG
IYAVDITAAY WRLRWQWGSP IEGESVAVQR LYQEWQRQPQ VQRTLLRDPS FSTPLLVQAL
WSPHAKQVLL LASEMAPAPP GSTYQLWLES DVQGGGRLLE NAGTFAVNGE GSLQWLSQPI
HSEQPTRLLV TLEPAGGSES PTGPPLLQSS FWIPAAQP
//
