ID Q2JL63_SYNJB Unreviewed; 368 AA.
AC Q2JL63;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=ISSoc14, transposase {ECO:0000313|EMBL:ABD02555.1};
GN OrderedLocusNames=CYB_1591 {ECO:0000313|EMBL:ABD02555.1};
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321332 {ECO:0000313|EMBL:ABD02555.1, ECO:0000313|Proteomes:UP000001938};
RN [1] {ECO:0000313|EMBL:ABD02555.1, ECO:0000313|Proteomes:UP000001938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13) {ECO:0000313|Proteomes:UP000001938};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP000240; ABD02555.1; -; Genomic_DNA.
DR RefSeq; WP_011433201.1; NC_007776.1.
DR AlphaFoldDB; Q2JL63; -.
DR STRING; 321332.CYB_1591; -.
DR KEGG; cyb:CYB_1591; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_16_5_3; -.
DR Proteomes; UP000001938; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF11; TNPB-LIKE PROTEIN MJ1635; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000001938};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 153..282
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 302..364
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 368 AA; 42615 MW; F50EDA53DE90964F CRC64;
MYLVRKLKLG VSEQLQLLSR AAGELYSKVL VHFWRVVRKK GLWLKPSTLM RWFPNDPENT
LHAHSADAVV QSFFASLKSW RERRQTDPNA RPPRRRRYYS KVQWKSSAIQ VVNGKLRLSN
GKGNEPLMIN WAWDTPVWVE MGWDGQQYEL RACYKVGDTL PEEEGEESNV AAVDLGEIHP
AVAHEGGQTY LANGRLLRSK RRYQNKLQGK LARLLARKKR GSRRWKRLIR SNRVSGTESL
RLQLKKLHHQ IQDILHKQTT RLVSTLHERG VQTVVIGDIR DIRMSANYNK KANQKIHQML
HGQARHQITY KAERLGMKVV LQDEQYSSQE CPVCGQRNKP KGRVYRCGCG FEFHRDGVGA
INIVATQR
//
