ID Q2JLP4_SYNJB Unreviewed; 330 AA.
AC Q2JLP4;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 97.
DE SubName: Full=Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ABD02360.1};
GN OrderedLocusNames=CYB_1392 {ECO:0000313|EMBL:ABD02360.1};
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321332 {ECO:0000313|EMBL:ABD02360.1, ECO:0000313|Proteomes:UP000001938};
RN [1] {ECO:0000313|EMBL:ABD02360.1, ECO:0000313|Proteomes:UP000001938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13) {ECO:0000313|Proteomes:UP000001938};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000240; ABD02360.1; -; Genomic_DNA.
DR RefSeq; WP_011433008.1; NC_007776.1.
DR AlphaFoldDB; Q2JLP4; -.
DR STRING; 321332.CYB_1392; -.
DR KEGG; cyb:CYB_1392; -.
DR eggNOG; COG4974; Bacteria.
DR HOGENOM; CLU_027562_9_2_3; -.
DR Proteomes; UP000001938; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd00397; DNA_BRE_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR PANTHER; PTHR30349:SF41; INTEGRASE_RECOMBINASE HI_1414-RELATED; 1.
DR PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000001938}.
FT DOMAIN 23..115
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 137..326
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..24
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 330 AA; 37359 MW; 70F9AB08C386E744 CRC64;
MREPRSGWAQ ETHPQSQPTG PVPSLSHLAA QFLQERQRDL APASRRTYRI ALEQFAKTCP
VPLPQVQPAH VQSFLNSLKG RPFRNRSGQR IHPPASPATY NLKRLALQQF FEWASQRGYL
QDPLPTQAIR PARLPARLPR DLDRLLLQRV LQRAQNHSLR YAALIRLMLE CGLRAQELLD
LTVQDFQISP EGSLLEVRCG KGSKPRAVAV GDPLSELLQQ YLSRERGPCA PTDPLFVSQS
RCLAYRGRPL TYDGLRHIVL KLTEPEPGHQ TPHQFRHSFA TLLLDRGVAP EHIQHLLGHT
TAAMTMRYTQ RANLRAAIAR SREILNQGLV
//
