ID Q2JM22_SYNJB Unreviewed; 814 AA.
AC Q2JM22;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 85.
DE SubName: Full=Sensory box protein {ECO:0000313|EMBL:ABD02225.1};
GN OrderedLocusNames=CYB_1250 {ECO:0000313|EMBL:ABD02225.1};
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321332 {ECO:0000313|EMBL:ABD02225.1, ECO:0000313|Proteomes:UP000001938};
RN [1] {ECO:0000313|EMBL:ABD02225.1, ECO:0000313|Proteomes:UP000001938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13) {ECO:0000313|Proteomes:UP000001938};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
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DR EMBL; CP000240; ABD02225.1; -; Genomic_DNA.
DR RefSeq; WP_011432877.1; NC_007776.1.
DR AlphaFoldDB; Q2JM22; -.
DR STRING; 321332.CYB_1250; -.
DR KEGG; cyb:CYB_1250; -.
DR eggNOG; COG2202; Bacteria.
DR eggNOG; COG2205; Bacteria.
DR eggNOG; COG4191; Bacteria.
DR HOGENOM; CLU_346790_0_0_3; -.
DR OrthoDB; 9763461at2; -.
DR Proteomes; UP000001938; Chromosome.
DR CDD; cd00130; PAS; 4.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 5.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013655; PAS_fold_3.
DR NCBIfam; TIGR00229; sensory_box; 4.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF08448; PAS_4; 4.
DR SMART; SM00086; PAC; 4.
DR SMART; SM00091; PAS; 5.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 5.
DR PROSITE; PS50113; PAC; 3.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001938}.
FT DOMAIN 1..39
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 79..131
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 332..384
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 462..514
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
SQ SEQUENCE 814 AA; 93555 MW; E0D888DE4AF2B527 CRC64;
MLAELDVLLE NAPIGIFRVD LQGRYRFANA KLAKIYGYTS SAHLMRHLSD FGHHLYADAA
GRRQIFQDLL AGKVGDGRVA QEFLIHSRKG LDLWVREQIQ VVRNPAGDPL CFEGYVEDIT
ARKQAEQALA ESQLRYERLV CAIPQALMIF SREGQCLEPI SSPENTYFAS LSAEHIQGKA
VGELFGPEVG DQLQRLIDRC LSSGSQQTLE YPLTNSAGEL RYQEICIVPY GANCVLGCIQ
DITERKRLEL ALLEIQQRFW GIVESCNLGI SLLPLEPEAS PHGMNSALKD ITGYSAEELK
ALPLEACIPD LADVETLKKL WQELVDGRRS HYEWEHPYTR KNGRIIWVKS QVYVVRDEEQ
KPLFAVYFLD DISERRSIKS ALEEIQNQLQ GIFNFCSQGI ALMSLDPDPR YLSLNPAMAE
ITGYSEEDWS ALKAEDYTPY PEDRERGEIL WNELLSGYTN NYEYEKVICR KDGREIWVRL
QLFAVRNAQN EPLFAIQFLE DISERKRAET HLRESLADLA RSEARYRALY EAIPDMLLQV
DRQGLVLSYK PPRGFAFAYP DDRYLNQYIQ DLFPEHWKTY FAPLLEKAFQ TGEIQVIEYP
LPKTSQDTAE ALPEYREARL LPFGPDEAIV LVRDITLRKR LELAQQTREA ELTALVQQRT
QQLERSLQFE SILRRLIHQI RATLDERQIL QTVVNELGKF LGVLFCNVGL YDSRRTYSLI
SYEYTTLSTS GVGARVQMKD FPLFYEQLWR GWCFQLCARD HQRDPNTLPP YLTKLACPIA
DDQGILGDLW LARPPEESMP LTPKTLNFAE FTEL
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