ID Q2JZ78_RHIEC Unreviewed; 320 AA.
AC Q2JZ78;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 24-JAN-2024, entry version 87.
DE SubName: Full=Probable D-ribose ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ABC94108.1};
GN OrderedLocusNames=RHE_PF00217 {ECO:0000313|EMBL:ABC94108.1};
OS Rhizobium etli (strain CFN 42 / ATCC 51251).
OG Plasmid p42f {ECO:0000313|EMBL:ABC94108.1,
OG ECO:0000313|Proteomes:UP000001936}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX NCBI_TaxID=347834 {ECO:0000313|EMBL:ABC94108.1, ECO:0000313|Proteomes:UP000001936};
RN [1] {ECO:0000313|EMBL:ABC94108.1, ECO:0000313|Proteomes:UP000001936}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFN 42 / ATCC 51251 {ECO:0000313|Proteomes:UP000001936};
RX PubMed=16505379; DOI=10.1073/pnas.0508502103;
RA Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.,
RA Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A.,
RA Jimenez-Jacinto V., Collado-Vides J., Davila G.;
RT "The partitioned Rhizobium etli genome: genetic and metabolic redundancy in
RT seven interacting replicons.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006).
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
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DR EMBL; CP000138; ABC94108.1; -; Genomic_DNA.
DR RefSeq; WP_011428525.1; NC_007766.1.
DR AlphaFoldDB; Q2JZ78; -.
DR KEGG; ret:RHE_PF00217; -.
DR HOGENOM; CLU_037628_3_3_5; -.
DR OMA; VQQPFEW; -.
DR OrthoDB; 569491at2; -.
DR Proteomes; UP000001936; Plasmid p42f.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProt.
DR CDD; cd06314; PBP1_tmGBP; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR30036:SF7; ABC TRANSPORTER PERIPLASMIC-BINDING PROTEIN YPHF; 1.
DR PANTHER; PTHR30036; D-XYLOSE-BINDING PERIPLASMIC PROTEIN; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 3: Inferred from homology;
KW Plasmid {ECO:0000313|EMBL:ABC94108.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001936};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..27
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 28..320
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004211077"
FT DOMAIN 34..286
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 320 AA; 33833 MW; 3042137D3A3E92EA CRC64;
MKQLKRNAAL FLAGLILSAA PIAVSDAADK PTLAFVVNGA SDFWKAAEAG VKKAQAELPD
YQLELKYPEQ ASVAIQQRLM EDLVSAGVKG IMVSAVDPKT QTEGLNKIGS QTALFTTDSD
APQTNRVAYI GSSNIDAGLQ AAEIAKKAMP DGGKCIGFVG LLGADNAKER IQGMKDGLKG
TKIELTDVRG DDIDQTRAKK NVEDALVASP DVTCMVGFYS YNTPRIYEAL RDAGKLGQIT
VVGFDDDPIT LGGVKEGTVA ATVVQQPFEW AYQGMKLMAA YLKGDKSGVP SNGLIIIPTV
IIGKDDVDKY AANLKAMAGK
//