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Database: UniProt
Entry: Q2JZ78_RHIEC
LinkDB: Q2JZ78_RHIEC
Original site: Q2JZ78_RHIEC 
ID   Q2JZ78_RHIEC            Unreviewed;       320 AA.
AC   Q2JZ78;
DT   07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT   07-MAR-2006, sequence version 1.
DT   24-JAN-2024, entry version 87.
DE   SubName: Full=Probable D-ribose ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ABC94108.1};
GN   OrderedLocusNames=RHE_PF00217 {ECO:0000313|EMBL:ABC94108.1};
OS   Rhizobium etli (strain CFN 42 / ATCC 51251).
OG   Plasmid p42f {ECO:0000313|EMBL:ABC94108.1,
OG   ECO:0000313|Proteomes:UP000001936}.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=347834 {ECO:0000313|EMBL:ABC94108.1, ECO:0000313|Proteomes:UP000001936};
RN   [1] {ECO:0000313|EMBL:ABC94108.1, ECO:0000313|Proteomes:UP000001936}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CFN 42 / ATCC 51251 {ECO:0000313|Proteomes:UP000001936};
RX   PubMed=16505379; DOI=10.1073/pnas.0508502103;
RA   Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.,
RA   Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A.,
RA   Jimenez-Jacinto V., Collado-Vides J., Davila G.;
RT   "The partitioned Rhizobium etli genome: genetic and metabolic redundancy in
RT   seven interacting replicons.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006).
CC   -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC   -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC       {ECO:0000256|ARBA:ARBA00007639}.
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DR   EMBL; CP000138; ABC94108.1; -; Genomic_DNA.
DR   RefSeq; WP_011428525.1; NC_007766.1.
DR   AlphaFoldDB; Q2JZ78; -.
DR   KEGG; ret:RHE_PF00217; -.
DR   HOGENOM; CLU_037628_3_3_5; -.
DR   OMA; VQQPFEW; -.
DR   OrthoDB; 569491at2; -.
DR   Proteomes; UP000001936; Plasmid p42f.
DR   GO; GO:0042597; C:periplasmic space; IEA:UniProt.
DR   CDD; cd06314; PBP1_tmGBP; 1.
DR   Gene3D; 3.40.50.2300; -; 2.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   InterPro; IPR025997; SBP_2_dom.
DR   PANTHER; PTHR30036:SF7; ABC TRANSPORTER PERIPLASMIC-BINDING PROTEIN YPHF; 1.
DR   PANTHER; PTHR30036; D-XYLOSE-BINDING PERIPLASMIC PROTEIN; 1.
DR   Pfam; PF13407; Peripla_BP_4; 1.
DR   SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE   3: Inferred from homology;
KW   Plasmid {ECO:0000313|EMBL:ABC94108.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001936};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..27
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           28..320
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5004211077"
FT   DOMAIN          34..286
FT                   /note="Periplasmic binding protein"
FT                   /evidence="ECO:0000259|Pfam:PF13407"
SQ   SEQUENCE   320 AA;  33833 MW;  3042137D3A3E92EA CRC64;
     MKQLKRNAAL FLAGLILSAA PIAVSDAADK PTLAFVVNGA SDFWKAAEAG VKKAQAELPD
     YQLELKYPEQ ASVAIQQRLM EDLVSAGVKG IMVSAVDPKT QTEGLNKIGS QTALFTTDSD
     APQTNRVAYI GSSNIDAGLQ AAEIAKKAMP DGGKCIGFVG LLGADNAKER IQGMKDGLKG
     TKIELTDVRG DDIDQTRAKK NVEDALVASP DVTCMVGFYS YNTPRIYEAL RDAGKLGQIT
     VVGFDDDPIT LGGVKEGTVA ATVVQQPFEW AYQGMKLMAA YLKGDKSGVP SNGLIIIPTV
     IIGKDDVDKY AANLKAMAGK
//
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