ID MT4B_ORYSJ Reviewed; 79 AA.
AC Q2QNE8; H2KX55;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE RecName: Full=Metallothionein-like protein 4B;
DE AltName: Full=Class I metallothionein-like protein 4B;
DE AltName: Full=OsMT-I-4b;
GN Name=MT4B; OrderedLocusNames=Os12g0568200, LOC_Os12g38051, LOC_Os12g38064;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare; TISSUE=Root;
RA Bohnert H.J., Borchert C., Brazille S., Brooks J., Eaton M., Ferrea H.,
RA Kawasaki S., McCollough A., Michalowski C.B., Palacio C., Scara G.,
RA Wheeler M., Zepeda G.R.;
RT "Functional genomics of plant stress tolerance.";
RL Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP GENE FAMILY, AND TISSUE SPECIFICITY.
RX PubMed=17002881; DOI=10.5483/bmbrep.2006.39.5.595;
RA Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.;
RT "Molecular analyses of the metallothionein gene family in rice (Oryza
RT sativa L.).";
RL J. Biochem. Mol. Biol. 39:595-606(2006).
CC -!- FUNCTION: Metallothioneins have a high content of cysteine residues
CC that bind various heavy metals. {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in roots. {ECO:0000269|PubMed:17002881}.
CC -!- SIMILARITY: Belongs to the metallothionein superfamily. Type 15 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF30084.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; BE039194; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; DP000011; ABA99636.1; -; Genomic_DNA.
DR EMBL; DP000011; ABG22054.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF30084.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014968; BAT17713.1; -; Genomic_DNA.
DR EMBL; AK243301; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015619845.1; XM_015764359.1.
DR AlphaFoldDB; Q2QNE8; -.
DR PaxDb; 39947-Q2QNE8; -.
DR EnsemblPlants; Os12t0568200-01; Os12t0568200-01; Os12g0568200.
DR GeneID; 4352563; -.
DR Gramene; Os12t0568200-01; Os12t0568200-01; Os12g0568200.
DR KEGG; osa:4352563; -.
DR eggNOG; KOG4738; Eukaryota.
DR HOGENOM; CLU_161105_1_0_1; -.
DR InParanoid; Q2QNE8; -.
DR OMA; GCPCGDN; -.
DR OrthoDB; 692845at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; Q2QNE8; OS.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR000347; Metalthion_15p.
DR PANTHER; PTHR33543; METALLOTHIONEIN-LIKE PROTEIN 2A; 1.
DR PANTHER; PTHR33543:SF42; METALLOTHIONEIN-LIKE PROTEIN 4B; 1.
DR Pfam; PF01439; Metallothio_2; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Metal-thiolate cluster; Reference proteome.
FT CHAIN 1..79
FT /note="Metallothionein-like protein 4B"
FT /id="PRO_0000263060"
SQ SEQUENCE 79 AA; 7720 MW; D75C94B7C41CD380 CRC64;
MSCGGSCNCG SCGCGGGCGK MYPDLAEKIT TTTTTATTVL GVAPEKGHFE VMVGKAAESG
EAAHGCSCGS SCKCNPCNC
//
