ID Q2QP00_ORYSJ Unreviewed; 1288 AA.
AC Q2QP00;
DT 24-JAN-2006, integrated into UniProtKB/TrEMBL.
DT 24-JAN-2006, sequence version 1.
DT 27-MAR-2024, entry version 132.
DE SubName: Full=G14587-6, putative, expressed {ECO:0000313|EMBL:ABA98876.1};
DE SubName: Full=Os12g0548100 protein {ECO:0000313|EMBL:BAT17543.1};
GN OrderedLocusNames=LOC_Os12g36170 {ECO:0000313|EMBL:ABA98876.1},
GN Os12g0548100 {ECO:0000313|EMBL:BAT17543.1};
GN ORFNames=OSNPB_120548100 {ECO:0000313|EMBL:BAT17543.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:ABA98876.1};
RN [1] {ECO:0000313|EMBL:ABA98876.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2] {ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RA Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3] {ECO:0000313|EMBL:ABA98876.1}
RP NUCLEOTIDE SEQUENCE.
RA Buell C.R., Wing R.A., McCombie W.A., Ouyang S.;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:ABA98876.1}
RP NUCLEOTIDE SEQUENCE.
RA Buell R.;
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:BAT17543.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23299411; DOI=10.1093/pcp/pcs183;
RA Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y., Wakimoto H.,
RA Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A., Inokuchi H., Ikemura T.,
RA Matsumoto T., Sasaki T., Itoh T.;
RT "Rice Annotation Project Database (RAP-DB): an integrative and interactive
RT database for rice genomics.";
RL Plant Cell Physiol. 54:E6-E6(2013).
RN [6] {ECO:0000313|EMBL:BAT17543.1, ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7] {ECO:0000313|EMBL:BAT17543.1}
RP NUCLEOTIDE SEQUENCE.
RA Sakai H., Kawahara Y., Matsumoto T., Buell C.R., Itoh T.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DP000011; ABA98876.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT17543.1; -; Genomic_DNA.
DR RefSeq; XP_015618715.1; XM_015763229.1.
DR AlphaFoldDB; Q2QP00; -.
DR STRING; 39947.Q2QP00; -.
DR PaxDb; 39947-Q2QP00; -.
DR EnsemblPlants; Os12t0548100-01; Os12t0548100-01; Os12g0548100.
DR GeneID; 4352458; -.
DR Gramene; Os12t0548100-01; Os12t0548100-01; Os12g0548100.
DR KEGG; osa:4352458; -.
DR eggNOG; KOG0413; Eukaryota.
DR HOGENOM; CLU_002301_1_0_1; -.
DR OMA; RIHPNIC; -.
DR OrthoDB; 38442at2759; -.
DR Proteomes; UP000059680; Chromosome 12.
DR GO; GO:0000779; C:condensed chromosome, centromeric region; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0010032; P:meiotic chromosome condensation; IBA:GO_Central.
DR GO; GO:0007076; P:mitotic chromosome condensation; IBA:GO_Central.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026971; CND1/NCAPD3.
DR InterPro; IPR032682; Cnd1_C.
DR PANTHER; PTHR14222; CONDENSIN; 1.
DR PANTHER; PTHR14222:SF1; CONDENSIN-2 COMPLEX SUBUNIT D3; 1.
DR Pfam; PF12717; Cnd1; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 4: Predicted;
KW DNA condensation {ECO:0000256|ARBA:ARBA00023067};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000059680}.
FT DOMAIN 888..1046
FT /note="Condensin complex subunit 1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF12717"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 149..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1208..1264
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 149..166
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1239..1255
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1288 AA; 138122 MW; 9AD2BFBB00743B9D CRC64;
MDAADEMDID AAADETGSPP SASGSLSTFL SELAALHRRS SGTSSSSSTS TSPPLSLASL
TFLSSAASPS SSIFPRLAAA GLPASSLSAP LAASLSSAHH PLPAAVAYLR LLLAPASPLL
SLFSPLPFLS LLLALRKSAS SSAASHDAAA AANPSSGSGS GSGSGKGNHR NRKRKSHQQR
QSPAAAPSLL PRALALLADA AGRLPLGEHP DARRSLVDTA AELAAFDVLV AVLGSGYYAE
AMPDLVRALA PVALSGSRSA ARASAVEFLA RKVVPLGVEG GEDGVRKAVG YLPRYLAAKA
PEKSEARAMA VEAIVEVVRA MGQLEMEGFA GYVVAMAKGK AKGRLLAVDL ILAMLPLLLP
SEGDDCGLQE GSWGLKFVRV LVERCSDTVG GVRARALTNA AQALDVLSER GMEVDRLQEV
MRIGNIGLGE LLRLRCADDK AAVRKAALVL ITKSIRLIGR PVDESLLSAM GAACSDPLVS
IRKAALAAIS EVFRNFPDER VTKEWLQAVP PLVIDSETSI QEECENLFLE LVLNRVCQAA
NLNLNDDSND MEEVFPKGTL DLLKSICDGE VAPCIKKICA SLGKKKKLKP LLASSLQNII
TISESLWLRG CKPIEMWTAP AGAWWLLSEV SSFAPKSVNW KFLSHHWKLL DNVGQDKGKV
RPKGEPNSAL WAVDRVSLLQ TISNVSMELP VEPAAELAHS LLTRIENFDM NLSEVDAHVK
SLKTLCKRKA KTAKEGETLI LKWVQQLICK AVNILDEYIK ETSEAAKGPK FFTPLSGKLK
GRKDASAQKS MSHAVIAVFT IGSLILACPT ANVQGVIPSL HTIITSGNSQ PRPKNLAGGT
VSFKELAPSL YIQSWDTMAK ICLVDDKLAK RYIPLFVQEL ERSDLATLRN NIMIALADFY
VRYTAMVDCY MSKITKSLRD PCEVVRRQTF ILLSKLLQRD YVKWRGVLFL RFLPSLVDES
EKIRHLADFL FGNILKAKAP LLAYNSFIEA IYVLNNCLGN GAQTESQGRL DGGPTLFAIR
GTDERSRSKR MHIYVSLLKQ MAPEHLLATS AKLCAEILAA ACDGLLNVDD AAGRAVLQDA
LQILACKEMR IHPNICTDNS EMDEECGDGG SSNATLQAAK GRAVTQVAKK NLIQIAIPIF
IELKRLLESK NSPLTGCLME CLRTLLKDYK NEFDEILVAD KQLQKELLYD MQKLDVAGKG
KAKAAAAAEA GPSGASPAVN GGGKRAADGS ARATARSVLK EVNRNTPTPP LNSMSVPKVR
SMLGVGSRRP AVLESVRRLE PFGSDDEN
//
