ID Q3AFS2_CARHZ Unreviewed; 543 AA.
AC Q3AFS2;
DT 22-NOV-2005, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2005, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=GGDEF domain protein {ECO:0000313|EMBL:ABB13740.1};
GN OrderedLocusNames=CHY_0140 {ECO:0000313|EMBL:ABB13740.1};
OS Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /
OS Z-2901).
OC Bacteria; Bacillota; Clostridia; Thermoanaerobacterales;
OC Thermoanaerobacteraceae; Carboxydothermus.
OX NCBI_TaxID=246194 {ECO:0000313|EMBL:ABB13740.1, ECO:0000313|Proteomes:UP000002706};
RN [1] {ECO:0000313|EMBL:ABB13740.1, ECO:0000313|Proteomes:UP000002706}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-161 / DSM 6008 / Z-2901
RC {ECO:0000313|Proteomes:UP000002706};
RX PubMed=16311624; DOI=10.1371/journal.pgen.0010065;
RA Wu M., Ren Q., Durkin A.S., Daugherty S.C., Brinkac L.M., Dodson R.J.,
RA Madupu R., Sullivan S.A., Kolonay J.F., Haft D.H., Nelson W.C.,
RA Tallon L.J., Jones K.M., Ulrich L.E., Gonzalez J.M., Zhulin I.B.,
RA Robb F.T., Eisen J.A.;
RT "Life in hot carbon monoxide: the complete genome sequence of
RT Carboxydothermus hydrogenoformans Z-2901.";
RL PLoS Genet. 1:563-574(2005).
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DR EMBL; CP000141; ABB13740.1; -; Genomic_DNA.
DR AlphaFoldDB; Q3AFS2; -.
DR STRING; 246194.CHY_0140; -.
DR KEGG; chy:CHY_0140; -.
DR eggNOG; COG2203; Bacteria.
DR eggNOG; COG3706; Bacteria.
DR HOGENOM; CLU_032209_0_0_9; -.
DR InParanoid; Q3AFS2; -.
DR OrthoDB; 9783388at2; -.
DR Proteomes; UP000002706; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002706};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..40
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 46..65
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 77..105
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 141..164
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 176..194
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 409..542
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 543 AA; 62102 MW; 2D7A5600AEC54A80 CRC64;
MAGKTKKLSK NYSMHKVNYW QIWRVIVSLA GFILTVFYLL KGSIQPPGAF FALLTVSFIL
ELTAIEICGS KIKGSYVFYL VTLLLKGKGF AVVLSFLAGL LASFLTKEEK TFPGYFFEGA
KNSLGILLGS HLAGYLPGGE FFLALIYTAG FILVDAVFMI LRAFFGENAG STKEEIFYYG
LNCFLTFTAG VLLTEAIKKN FYQALFLGLL LTEAFYLVIK INQKLLNQSL DYVTLWNISR
TFHRLETPDD MLKAMLQELK NTFSYHTGVI YTYSESLRKY IPRYLNTDFP ELPGPEFHNT
LLSEMGNRKT AALIKHPQLG SIAVVPLQNR RDVFGYLVIV APKGQNYSHS QLRRLENISG
QVALAVYNGY LYLRLKELAQ KDELTGLYNR RYFLERLNEE HLRSRRHKLN YTIVLLDIDY
FKKINDTYGH DCGDLVLNDF GRFLKDTLRR TDLSARYGGE EFVVLLPQTG KKEAYLLAER
LREKVKERVL IFQGQKVKYT VSMGLAAYPE DAEEYRELLS LADKALYQAK NRGRDKVVMV
NNF
//
