ID Q3J8G5_NITOC Unreviewed; 754 AA.
AC Q3J8G5;
DT 08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT 08-NOV-2005, sequence version 1.
DT 24-JAN-2024, entry version 111.
DE SubName: Full=ATP-dependent Clp protease {ECO:0000313|EMBL:ABA58881.1};
GN OrderedLocusNames=Noc_2425 {ECO:0000313|EMBL:ABA58881.1};
OS Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB
OS 11848 / C-107).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Nitrosococcus.
OX NCBI_TaxID=323261 {ECO:0000313|EMBL:ABA58881.1, ECO:0000313|Proteomes:UP000006838};
RN [1] {ECO:0000313|Proteomes:UP000006838}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107
RC {ECO:0000313|Proteomes:UP000006838};
RX PubMed=16957257; DOI=10.1128/AEM.00463-06;
RA Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J.,
RA Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T.,
RA Vergez L.M., Ward B.B.;
RT "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-
RT oxidizing bacterium Nitrosococcus oceani ATCC 19707.";
RL Appl. Environ. Microbiol. 72:6299-6315(2006).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CP000127; ABA58881.1; -; Genomic_DNA.
DR RefSeq; WP_011330960.1; NC_007484.1.
DR AlphaFoldDB; Q3J8G5; -.
DR STRING; 323261.Noc_2425; -.
DR KEGG; noc:Noc_2425; -.
DR eggNOG; COG0542; Bacteria.
DR HOGENOM; CLU_005070_4_1_6; -.
DR InParanoid; Q3J8G5; -.
DR OMA; GRVIQEH; -.
DR Proteomes; UP000006838; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0043335; P:protein unfolding; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR013461; ClpA.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR02639; ClpA; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF111; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Hydrolase {ECO:0000313|EMBL:ABA58881.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:ABA58881.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000006838};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 1..144
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 145..172
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 754 AA; 83058 MW; D2FB1A7460537406 CRC64;
MLSRDLETSL NHAFKDARER MHEFLTVEHL LFAMLDNPAA AAVLRACGAN LEQLKQEITV
FLNETTPLLS TEDGRDTQPT LGFQRVLQRA VLQVQSSGQK EVTGANVLVA IYGEQQSQAV
YFLKRQHMTR LDIVNYISHG ISKVDPQGSG GDSAGAPEEA ETAGAETSGQ NPLETYATNL
NRLAAQGRID PLIGRSLELE RTIQILCRRR KNNPLFVGEA GVGKTALAEG LAWKISEGDI
PDILRDCTIY SLDMGTLLAG TKYRGDFEKR LKGILSQLKK EKSAILFIDE IHTVIGAGSA
SGGVMDASNL IKPALASGEL KCIGSTTYQE YRNIFEKDRA LARRFQKIDI PEPSVEETVQ
ILRGLKPRLE AHHKLRFSQA ALRTAAELSA RYINDRHLPD KAIDVLDECG ASQQLLTPSR
RKKVIGVQDV QTVVAKMARI PPKHVSASDK ESLAKLEANL KRVIFGQDKA IEALGAAIKM
SRSGLGDTDR PVGSFLFSGP TGVGKTEVTR QLAHILGIEL IRFDMSEYME RHTVSRLIGA
PPGYVGYDQG GLLTEAICKN PHAVLLLDEI EKAHPDVFNL LLQVMDHGTL TDNNGRKADF
RNVILIMTSN AGAQEISRTS IGFTLQDHSS DAMEVIRRTF SPEFRNRLDD IIQFQSLDAP
AISRVVDKFI FELEFLLQDK NVTLEVSETA RAWLAKHGYD EKMGARPMAR LIQERIKRPL
AEELLFGKLA KEGHVAVEVV GGELRLACQS GSSS
//