ID Q3JCR5_NITOC Unreviewed; 105 AA.
AC Q3JCR5;
DT 08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT 08-NOV-2005, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE SubName: Full=Hemimethylated DNA-binding region {ECO:0000313|EMBL:ABA57381.1};
GN OrderedLocusNames=Noc_0868 {ECO:0000313|EMBL:ABA57381.1};
OS Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB
OS 11848 / C-107).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Nitrosococcus.
OX NCBI_TaxID=323261 {ECO:0000313|EMBL:ABA57381.1, ECO:0000313|Proteomes:UP000006838};
RN [1] {ECO:0000313|Proteomes:UP000006838}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107
RC {ECO:0000313|Proteomes:UP000006838};
RX PubMed=16957257; DOI=10.1128/AEM.00463-06;
RA Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J.,
RA Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T.,
RA Vergez L.M., Ward B.B.;
RT "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-
RT oxidizing bacterium Nitrosococcus oceani ATCC 19707.";
RL Appl. Environ. Microbiol. 72:6299-6315(2006).
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DR EMBL; CP000127; ABA57381.1; -; Genomic_DNA.
DR RefSeq; WP_002811509.1; NC_007484.1.
DR AlphaFoldDB; Q3JCR5; -.
DR KEGG; noc:Noc_0868; -.
DR eggNOG; COG3785; Bacteria.
DR HOGENOM; CLU_123865_0_1_6; -.
DR InParanoid; Q3JCR5; -.
DR Proteomes; UP000006838; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.390; Hemimethylated DNA-binding domain; 1.
DR InterPro; IPR011722; Hemimethylated_DNA-bd_dom.
DR InterPro; IPR036623; Hemimethylated_DNA-bd_sf.
DR NCBIfam; TIGR02097; yccV; 1.
DR PANTHER; PTHR48351; YCCV-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48351:SF1; YCCV-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08755; YccV-like; 1.
DR SMART; SM00992; YccV-like; 1.
DR SUPFAM; SSF141255; YccV-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:ABA57381.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000006838}.
FT DOMAIN 5..101
FT /note="Hemimethylated DNA-binding"
FT /evidence="ECO:0000259|SMART:SM00992"
SQ SEQUENCE 105 AA; 12275 MW; 29F90DC41BAA9BC3 CRC64;
MEQAKAKFTI GQIVRHKLFH YRGVVVDADP SFQGSPEWYE HMACSQPPKD RPWYHVLVND
ADYETYVAER NLDLDGSGQP INHPAVEMFF DELHEGVYRC QRHIN
//
