ID Q3SC85_SOLLC Unreviewed; 220 AA.
AC Q3SC85;
DT 11-OCT-2005, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2005, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE SubName: Full=60S ribosomal protein L10 {ECO:0000313|EMBL:AAY97865.1, ECO:0000313|EnsemblPlants:Solyc06g007520.3.1};
GN Name=ACI29 {ECO:0000313|EMBL:AAY97865.1};
GN Synonyms=778217 {ECO:0000313|EnsemblPlants:Solyc06g007520.3.1};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081 {ECO:0000313|EMBL:AAY97865.1};
RN [1] {ECO:0000313|EMBL:AAY97865.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Cotyledon {ECO:0000313|EMBL:AAY97865.1};
RA Cai X., Hong W.;
RT "Signaling pathways downstream tomato disease resistance genes Cf-4 and Cf-
RT 9.";
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:Solyc06g007520.3.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc06g007520.3.1};
RX PubMed=22660326; DOI=10.1038/nature11119;
RG Tomato Genome Consortium;
RT "The tomato genome sequence provides insights into fleshy fruit
RT evolution.";
RL Nature 485:635-641(2012).
RN [3] {ECO:0000313|EnsemblPlants:Solyc06g007520.3.1}
RP IDENTIFICATION.
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc06g007520.3.1};
RG EnsemblPlants;
RL Submitted (JAN-2019) to UniProtKB.
RN [4] {ECO:0007829|PDB:7QIZ}
RP STRUCTURE BY ELECTRON MICROSCOPY (2.38 ANGSTROMS).
RA Cottilli P., Itoh Y., Nobe Y., Petrov A.S., Purificacion L., Taoka M.,
RA Amunts A.;
RT "Specific features and methylation sites of a plant ribosome.";
RL Submitted (DEC-2021) to the PDB data bank.
RN [5] {ECO:0007829|PDB:7QIW}
RP STRUCTURE BY ELECTRON MICROSCOPY (2.35 ANGSTROMS).
RX PubMed=35643637; DOI=10.1016/j.xplc.2022.100342;
RA Cottilli P., Itoh Y., Nobe Y., Petrov A.S., Lison P., Taoka M., Amunts A.;
RT "Cryo-EM structure and rRNA modification sites of a plant ribosome.";
RL Plant Commun 3:100342-100342(2022).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000256|ARBA:ARBA00008931}.
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DR EMBL; DQ056435; AAY97865.1; -; mRNA.
DR RefSeq; NP_001234751.1; NM_001247822.2.
DR PDB; 7QIW; EM; 2.35 A; L=1-220.
DR PDB; 7QIZ; EM; 2.38 A; L=1-220.
DR AlphaFoldDB; Q3SC85; -.
DR EMDB; EMD-14001; -.
DR EMDB; EMD-14004; -.
DR SMR; Q3SC85; -.
DR STRING; 4081.Q3SC85; -.
DR PaxDb; 4081-Solyc06g007520-2-1; -.
DR EnsemblPlants; Solyc06g007520.3.1; Solyc06g007520.3.1; Solyc06g007520.3.
DR GeneID; 778217; -.
DR Gramene; Solyc06g007520.3.1; Solyc06g007520.3.1; Solyc06g007520.3.
DR KEGG; sly:778217; -.
DR InParanoid; Q3SC85; -.
DR OMA; RRPACCY; -.
DR OrthoDB; 1116065at2759; -.
DR Proteomes; UP000004994; Chromosome 6.
DR ExpressionAtlas; Q3SC85; baseline and differential.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; Ribosomal protein L10e/L16; 1.
DR InterPro; IPR047873; Ribosomal_uL16.
DR InterPro; IPR018255; Ribosomal_uL16_CS_euk_arc.
DR InterPro; IPR016180; Ribosomal_uL16_dom.
DR InterPro; IPR001197; Ribosomal_uL16_euk_arch.
DR InterPro; IPR036920; Ribosomal_uL16_sf.
DR NCBIfam; TIGR00279; uL16_euk_arch; 1.
DR PANTHER; PTHR11726; 60S RIBOSOMAL PROTEIN L10; 1.
DR PANTHER; PTHR11726:SF44; 60S RIBOSOMAL PROTEIN L10-LIKE; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PIRSF; PIRSF005590; Ribosomal_L10; 1.
DR SUPFAM; SSF54686; Ribosomal protein L16p/L10e; 1.
DR PROSITE; PS01257; RIBOSOMAL_L10E; 1.
PE 1: Evidence at protein level;
KW 3D-structure {ECO:0007829|PDB:7QIW, ECO:0007829|PDB:7QIZ};
KW Reference proteome {ECO:0000313|Proteomes:UP000004994};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000313|EMBL:AAY97865.1}.
SQ SEQUENCE 220 AA; 24861 MW; 7EF32469E67D7932 CRC64;
MGRRPARCYR QIKNKPYPKS RFCRGVPDPK IRIYDVGMKK KGVDEFPFCV HLVSWEKENV
SSEALEAARI ACNKYMTKSA GKDAFHLRVR VHPFHVLRIN KMLSCAGADR LQTGMRGAFG
KPQGVCARVA IGQVLLSVRC KDGNANHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFSRTD
YLKYKSENRI VPDGVNAKLL GCHGRLAARQ PGRAFLEAAN
//
