ID Q3STC3_NITWN Unreviewed; 692 AA.
AC Q3STC3;
DT 11-OCT-2005, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2005, sequence version 1.
DT 27-MAR-2024, entry version 121.
DE SubName: Full=Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:ABA04468.1};
DE EC=3.2.1.68 {ECO:0000313|EMBL:ABA04468.1};
GN OrderedLocusNames=Nwi_1206 {ECO:0000313|EMBL:ABA04468.1};
OS Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 /
OS NCIMB 11846 / Nb-255).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Nitrobacter.
OX NCBI_TaxID=323098 {ECO:0000313|EMBL:ABA04468.1, ECO:0000313|Proteomes:UP000002531};
RN [1] {ECO:0000313|EMBL:ABA04468.1, ECO:0000313|Proteomes:UP000002531}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255
RC {ECO:0000313|Proteomes:UP000002531};
RX PubMed=16517654; DOI=10.1128/AEM.72.3.2050-2063.2006;
RA Starkenburg S.R., Chain P.S., Sayavedra-Soto L.A., Hauser L., Land M.L.,
RA Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J.,
RA Hickey W.J.;
RT "Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium
RT Nitrobacter winogradskyi Nb-255.";
RL Appl. Environ. Microbiol. 72:2050-2063(2006).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CP000115; ABA04468.1; -; Genomic_DNA.
DR AlphaFoldDB; Q3STC3; -.
DR STRING; 323098.Nwi_1206; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; nwi:Nwi_1206; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_5; -.
DR Proteomes; UP000002531; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0019156; F:isoamylase activity; IEA:UniProtKB-EC.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000313|EMBL:ABA04468.1};
KW Hydrolase {ECO:0000313|EMBL:ABA04468.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002531}.
FT DOMAIN 139..572
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 469..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 692 AA; 78551 MW; 93F63C7D70D22412 CRC64;
MMRVSEGTHV RLGSTWDGRG TNFALFSAHA EKVELCLFDS KGRREIERIA LPEHTENIWH
CYLNDVAPGQ LYGYRVYGPY DPQHGHRFNP HKLLLDPYAK KISGRLVWSD AHFAYRAGSP
REDLSFDRRD NARAMPKATV IDETFNWGRR EPRPNATWEE TIIYEAHVKG LTKTRMDIAP
ELRGTYGALA APAMIDHLRR LGVTTIELLP VHGFVDDRHL VERKLSNYWG YNSLSFFAPE
QRYAKGAALD EFRMTVARLH DAGFEIMLDV VYNHTAEGNH LGPTLSFRGI DNASYYWLMP
DDPRYYDDFT GTGNSLNLTH PRVLQMVMDS LRYWVEVCHI DGFRFDLAST LARGAHGFDR
NSAFFNAIRQ DPVLANVKLV AEPWDVGPGG YQVGGFPSQW SEWNDRYRST MRRYWAGEGN
LIGDVSRRMT GSSDLFNHDD RAPRAGVNHV TVHDGFTLAD LFSYNEKHNE ANGEDNRDGS
NDNLSNNCGH EGPTDDPAIL SLRRQLRKNQ LACLLLAQGI PLLLAGDEVG NSQSGNNNAY
CQDNEIGWID WSDLGDREND MTDFVGHLTA IRRRFAQIRS RQWVTAKGIN GSYSVLWLTP
EGNEMTEADW NFPEGRFLSY VLGPVESHEQ ALYVVLNAAP DPIEFRIPNL EEYKTWSIVL
HTTDDDVDGV PRHPNTTMQA PPRSVIAFAG QR
//
