ID Q3UK02_MOUSE Unreviewed; 268 AA.
AC Q3UK02;
DT 11-OCT-2005, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2005, sequence version 1.
DT 27-MAR-2024, entry version 114.
DE RecName: Full=Large ribosomal subunit protein bL9m {ECO:0000256|ARBA:ARBA00035194};
DE AltName: Full=39S ribosomal protein L9, mitochondrial {ECO:0000256|ARBA:ARBA00035381};
GN Name=Mrpl9 {ECO:0000313|Ensembl:ENSMUSP00000142859.2,
GN ECO:0000313|MGI:MGI:2137211};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090 {ECO:0000313|EMBL:BAE27002.1};
RN [1] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RX PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9;
RA Carninci P., Hayashizaki Y.;
RT "High-efficiency full-length cDNA cloning.";
RL Methods Enzymol. 303:19-44(1999).
RN [2] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RX PubMed=11042159; DOI=10.1101/gr.145100;
RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT full-length cDNA libraries for rapid discovery of new genes.";
RL Genome Res. 10:1617-1630(2000).
RN [3] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RX PubMed=11076861; DOI=10.1101/gr.152600;
RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT pipeline with 384 multicapillary sequencer.";
RL Genome Res. 10:1757-1771(2000).
RN [4] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RX PubMed=11217851; DOI=10.1038/35055500;
RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium;
RT "Functional annotation of a full-length mouse cDNA collection.";
RL Nature 409:685-690(2001).
RN [5] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RX PubMed=12466851; DOI=10.1038/nature01266;
RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team;
RT "Analysis of the mouse transcriptome based on functional annotation of
RT 60,770 full-length cDNAs.";
RL Nature 420:563-573(2002).
RN [6] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F.,
RA Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M.,
RA Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K.,
RA Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T.,
RA Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.;
RL Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RG The FANTOM Consortium;
RG Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group);
RT "The Transcriptional Landscape of the Mammalian Genome.";
RL Science 309:1559-1563(2005).
RN [8] {ECO:0000313|EMBL:BAE27002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BALB/C {ECO:0000313|EMBL:BAE27002.1};
RX PubMed=16141073; DOI=10.1126/science.1112009;
RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium;
RT "Antisense Transcription in the Mammalian Transcriptome.";
RL Science 309:1564-1566(2005).
RN [9] {ECO:0000313|Ensembl:ENSMUSP00000142859.2, ECO:0000313|Proteomes:UP000000589}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000142859.2,
RC ECO:0000313|Proteomes:UP000000589};
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [10] {ECO:0007829|PubMed:21183079}
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL Cell 143:1174-1189(2010).
RN [11] {ECO:0000313|Ensembl:ENSMUSP00000142859.2}
RP IDENTIFICATION.
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000142859.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL9 family.
CC {ECO:0000256|ARBA:ARBA00010605}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AK146237; BAE27002.1; -; mRNA.
DR ProteomicsDB; 341463; -.
DR Antibodypedia; 1667; 224 antibodies from 26 providers.
DR Ensembl; ENSMUST00000196143.2; ENSMUSP00000142859.2; ENSMUSG00000028140.14.
DR AGR; MGI:2137211; -.
DR MGI; MGI:2137211; Mrpl9.
DR VEuPathDB; HostDB:ENSMUSG00000028140; -.
DR GeneTree; ENSGT00390000008281; -.
DR HOGENOM; CLU_1269402_0_0_1; -.
DR ChiTaRS; Mrpl9; mouse.
DR Proteomes; UP000000589; Chromosome 3.
DR Bgee; ENSMUSG00000028140; Expressed in urinary bladder urothelium and 259 other cell types or tissues.
DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; IEA:Ensembl.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.40.5.10; Ribosomal protein L9, N-terminal domain; 1.
DR InterPro; IPR000244; Ribosomal_bL9.
DR InterPro; IPR009027; Ribosomal_bL9/RNase_H1_N.
DR InterPro; IPR020070; Ribosomal_bL9_N.
DR InterPro; IPR036935; Ribosomal_bL9_N_sf.
DR PANTHER; PTHR21368:SF18; 39S RIBOSOMAL PROTEIN L9, MITOCHONDRIAL; 1.
DR PANTHER; PTHR21368; 50S RIBOSOMAL PROTEIN L9; 1.
DR Pfam; PF01281; Ribosomal_L9_N; 1.
DR SUPFAM; SSF55658; L9 N-domain-like; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|EPD:Q3UK02,
KW ECO:0007829|MaxQB:Q3UK02};
KW Reference proteome {ECO:0000313|Proteomes:UP000000589};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980}.
FT DOMAIN 92..136
FT /note="Ribosomal protein L9"
FT /evidence="ECO:0000259|Pfam:PF01281"
SQ SEQUENCE 268 AA; 30840 MW; 5ADC52FB840EFDEE CRC64;
MAASVAPGVR TLWWAGAAWL RQGGIRELFR PRIEGSTPGR DFSLSHYQST VIVERWWKVP
LAGEGRKPHL HRRHRVYKLV EDTKHRPKDN LELILTQSVD EIGVRGDLVS VKKSVGRNKL
LSQGLAVYAS PENRKLFEEE KSLRREGKLE KIQTKAGEAT VKFLRSCHLE VGMKNNVKWE
LNPEIVARHF FKNLGVVVAP HALRLPEEPI TRWGEYWCDV TTRGHQGIRN RTITRLKMEA
NMEADRKKIL ILCGFQQPQV AKTFTRLE
//
