ID Q478P9_DECAR Unreviewed; 667 AA.
AC Q478P9;
DT 13-SEP-2005, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2005, sequence version 1.
DT 27-MAR-2024, entry version 104.
DE SubName: Full=PAS:GGDEF:Hemerythrin HHE cation binding region {ECO:0000313|EMBL:AAZ48682.1};
GN OrderedLocusNames=Daro_3954 {ECO:0000313|EMBL:AAZ48682.1};
OS Dechloromonas aromatica (strain RCB).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Rhodocyclales; Azonexaceae;
OC Dechloromonas.
OX NCBI_TaxID=159087 {ECO:0000313|EMBL:AAZ48682.1};
RN [1] {ECO:0000313|EMBL:AAZ48682.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RCB {ECO:0000313|EMBL:AAZ48682.1};
RA Salinero K.K., Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S.,
RA Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.;
RT "Complete sequence of Dechloromonas aromatica RCB.";
RL Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the hemerythrin family.
CC {ECO:0000256|ARBA:ARBA00010587}.
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DR EMBL; CP000089; AAZ48682.1; -; Genomic_DNA.
DR AlphaFoldDB; Q478P9; -.
DR STRING; 159087.Daro_3954; -.
DR KEGG; dar:Daro_3954; -.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG2703; Bacteria.
DR eggNOG; COG5000; Bacteria.
DR HOGENOM; CLU_411461_0_0_4; -.
DR OrthoDB; 9812260at2; -.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd12107; Hemerythrin; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 1.20.120.50; Hemerythrin-like; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR012312; Hemerythrin-like.
DR InterPro; IPR035938; Hemerythrin-like_sf.
DR InterPro; IPR012827; Hemerythrin_metal-bd.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; NF033749; bact_hemeryth; 1.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR02481; hemeryth_dom; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR PANTHER; PTHR46663:SF3; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF01814; Hemerythrin; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF47188; Hemerythrin-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 3: Inferred from homology;
KW Iron {ECO:0000256|ARBA:ARBA00023004}; Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 44..61
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 67..85
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 97..117
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 123..143
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 155..173
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 193..216
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 236..282
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 309..361
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 393..527
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 667 AA; 74618 MW; 8A060AF4212B4972 CRC64;
MMSDMNSLLD IRTLILVITI VVTCRTFILG YVWKITRPYR PASYWAIGSL LISVGELLVG
LRDHISPVVS ILLAQCLIMT GWMSITGGIS IAARHKPAWR TGGAFIALAI LCTFWFLVIS
PDFAIRTYAA SLPVIGFDLY AAFVCLRFKE GAQRATFRIL AITLLAQVIS NLVKTAYIGI
NELTQLFDAR WQVGQFYVVS VITASVSTAL FVLLAVQRLQ EQLNAELLAR REIDHSVQLA
AMVYQASSEG MLVTEPDGRI ISVNPAFTAI SGYTQDELVG KTPRIFKSGK QEPEFYAAMW
REIIATGHWK GELWNRHKDG NLSAEALSIN TIRNPDGSPQ RFVALYHDVT SQKQSAEVIY
HQANHDQLTN LANRNHFFQQ LSKELSRARR TGKRVGLLFT DLNRFKPIND QFGHEAGDTV
LKTVSQRWLA CVRDNDLLAR IGGDEFALII CDLNDVSQTK IIARKLIATL EAPIAIGNDQ
SCTVGTSIGI AIYPDNAMEM DSLISVADAA MYASKSSGNN IIRLADVVAS EKKNQSDWIV
FESGHLVGVK KIDEQHQELV RMVNKINRAI HSRCEDASLK LMFNELVAFT EHHFSTELRF
MIDFHYPETD VHDQQHQALV AQLSNLITRF EQGDELQSLQ MIKDWLLRHI EHADKPLGAY
LASKGAN
//
