ID Q49Z18_STAS1 Unreviewed; 716 AA.
AC Q49Z18;
DT 13-SEP-2005, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2005, sequence version 1.
DT 27-MAR-2024, entry version 103.
DE SubName: Full=Putative RNA binding protein {ECO:0000313|EMBL:BAE17960.1};
GN OrderedLocusNames=SSP0815 {ECO:0000313|EMBL:BAE17960.1};
OS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM
OS 20229 / NCIMB 8711 / NCTC 7292 / S-41).
OC Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
OC Staphylococcus.
OX NCBI_TaxID=342451 {ECO:0000313|EMBL:BAE17960.1, ECO:0000313|Proteomes:UP000006371};
RN [1] {ECO:0000313|EMBL:BAE17960.1, ECO:0000313|Proteomes:UP000006371}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41
RC {ECO:0000313|Proteomes:UP000006371};
RX PubMed=16135568; DOI=10.1073/pnas.0502950102;
RA Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K., Higashide M.,
RA Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S., Hattori M., Ohta T.;
RT "Whole genome sequence of Staphylococcus saprophyticus reveals the
RT pathogenesis of uncomplicated urinary tract infection.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP008934; BAE17960.1; -; Genomic_DNA.
DR RefSeq; WP_011302708.1; NZ_MTGA01000032.1.
DR AlphaFoldDB; Q49Z18; -.
DR KEGG; ssp:SSP0815; -.
DR PATRIC; fig|342451.11.peg.817; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_9; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000006371; Chromosome.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006371};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980}.
FT DOMAIN 643..712
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 716 AA; 80694 MW; 8B3AF38A6E884CF6 CRC64;
MDSNLIQSIR DKYSFTTKQI NAVLSLLEDK NTVPFIARYR KEQTGGLDEV EIKQIDDEYQ
YMVNLQKRKE EVINNIEEQG LLTSDLKSDI LKQKKLQRVE DLYRPFKQKK KTRATEAKRK
GLEPFAQWLQ QTNIDTSVET KAQQFINDEV TSVEDAIKGA QDIIAEIVSD KPIYRSKILK
DTFQQGNIIT QKKKHAEDEK EIFSMYYDYT EPIKKIANHR VLAVNRGEKE KVLSVKIEMD
IQGIENFIRS KEISSEHNGT YVIIDAIKDS LKRLIMPSIE REIRSDLTEK AENHAIDVFS
ENLRNLLLQP PMKGKQILGV DPAFRTGCKL AVINPFGTFV AKGVMYPHPP VNKKEDAEKI
FVDFVKTYDV ELIAIGNGTA SRETEQFVAS MIQEHQLNVQ FIIVNEAGAS VYSASEVARN
EFPDFQVEER SAVSIGRRVQ DPLSELVKID PKSIGVGQYQ HDVNQKSLEG ALSFVVETAV
NQVGVDVNTA SRSLLQYVSG LTPTIAQNII DYREENGAIT HNKEIAKVKR LGAKTFEQSI
GFMRIVGGKE PLDNTSIHPE SYNVANQLLT EIEMTTHDLG MEKLKLALNK IDIVAMAEKL
NIGQPTLEDI INSLIAPNRD PRDEFETPIL KSDVLSIEDL TKNMKLSGTV RNVVDFGAFV
DIGVKQDGLV HVSKLAKKFV KNPMDIVSVG DIVDVWILDI DDKKGKVSLT MIDPNG
//
