ID Q4FNJ4_PELUB Unreviewed; 299 AA.
AC Q4FNJ4;
DT 30-AUG-2005, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2005, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=CarD-like/TRCF RNAP-interacting domain-containing protein {ECO:0000259|SMART:SM01058};
GN Name=carD {ECO:0000313|EMBL:AAZ21245.1};
GN OrderedLocusNames=SAR11_0423 {ECO:0000313|EMBL:AAZ21245.1};
OS Pelagibacter ubique (strain HTCC1062).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales;
OC Candidatus Pelagibacteraceae; Pelagibacter.
OX NCBI_TaxID=335992 {ECO:0000313|EMBL:AAZ21245.1, ECO:0000313|Proteomes:UP000002528};
RN [1] {ECO:0000313|EMBL:AAZ21245.1, ECO:0000313|Proteomes:UP000002528}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HTCC1062 {ECO:0000313|EMBL:AAZ21245.1,
RC ECO:0000313|Proteomes:UP000002528};
RX PubMed=16109880; DOI=10.1126/science.1114057;
RA Giovannoni S.J., Tripp H.J., Givan S., Podar M., Vergin K.L., Baptista D.,
RA Bibbs L., Eads J., Richardson T.H., Noordewier M., Rappe M.S., Short J.M.,
RA Carrington J.C., Mathur E.J.;
RT "Genome streamlining in a cosmopolitan oceanic bacterium.";
RL Science 309:1242-1245(2005).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000084; AAZ21245.1; -; Genomic_DNA.
DR AlphaFoldDB; Q4FNJ4; -.
DR STRING; 335992.SAR11_0423; -.
DR KEGG; pub:SAR11_0423; -.
DR eggNOG; COG1329; Bacteria.
DR HOGENOM; CLU_048259_0_0_5; -.
DR Proteomes; UP000002528; Chromosome.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 1.20.58.1290; CarD-like, C-terminal domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR042215; CarD-like_C.
DR InterPro; IPR048792; CarD_C.
DR PANTHER; PTHR38447:SF1; RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR CARD; 1.
DR PANTHER; PTHR38447; TRANSCRIPTION FACTOR YDEB-RELATED; 1.
DR Pfam; PF21095; CarD_C; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002528}.
FT DOMAIN 108..216
FT /note="CarD-like/TRCF RNAP-interacting"
FT /evidence="ECO:0000259|SMART:SM01058"
FT REGION 274..299
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 299 AA; 34096 MW; 2266C2278A39E3EF CRC64;
MKKTSTTNIL AKIFKKTPEK KVKKKTKAKV AKKPTLPKAK VVKKKIPVKK TKTIKATPTK
IKKNLKTVSK KAVPEKVEIK TDNLRISKSN EVKPEIKKVK KQETEKREYK VKDYVVYPKH
GVGQITEFKK INIGGIDVET YVLKFEKDKA NGMVPVNKQS HLRPLATINQ VNKCISILKS
KPKIKRSMWS RRAQEYEAKI SSGKIYELAE VVRDLNKGDD LMVDQSYSER QLFEKAYERI
LSEFQIVMGI SLEDTQKKLD KALKRNLEGQ AKAVAAPTKI KEPITESDTD SEPITDTED
//
