ID Q4K7D2_PSEF5 Unreviewed; 201 AA.
AC Q4K7D2;
DT 02-AUG-2005, integrated into UniProtKB/TrEMBL.
DT 02-AUG-2005, sequence version 1.
DT 27-MAR-2024, entry version 109.
DE SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AAY94000.1};
GN OrderedLocusNames=PFL_4770 {ECO:0000313|EMBL:AAY94000.1};
OS Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=220664 {ECO:0000313|EMBL:AAY94000.1, ECO:0000313|Proteomes:UP000008540};
RN [1] {ECO:0000313|EMBL:AAY94000.1, ECO:0000313|Proteomes:UP000008540}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-477 / NRRL B-23932 / Pf-5
RC {ECO:0000313|Proteomes:UP000008540};
RX PubMed=15980861; DOI=10.1038/nbt1110;
RA Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.,
RA Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J.,
RA Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J.,
RA Gwinn M.L., Zhou L., Schneider D.J., Cartinhour S.W., Nelson W.C.,
RA Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S.III.,
RA Thomashow L.S., Loper J.E.;
RT "Complete genome sequence of the plant commensal Pseudomonas fluorescens
RT Pf-5.";
RL Nat. Biotechnol. 23:873-878(2005).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
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DR EMBL; CP000076; AAY94000.1; -; Genomic_DNA.
DR RefSeq; WP_011063024.1; NC_004129.6.
DR AlphaFoldDB; Q4K7D2; -.
DR STRING; 220664.PFL_4770; -.
DR GeneID; 77169601; -.
DR KEGG; pfl:PFL_4770; -.
DR PATRIC; fig|220664.5.peg.4881; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_117621_1_0_6; -.
DR Proteomes; UP000008540; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR048090; CSP_N_ext_dom.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR NCBIfam; NF041604; CSP_NTE_dom; 1.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF139; COLD SHOCK PROTEIN CSPV; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:AAY94000.1};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 36..55
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 67..88
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 94..115
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 132..196
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
SQ SEQUENCE 201 AA; 21919 MW; 7DF81A153EB12D86 CRC64;
MLKIVHLLTG IAALLLSLIP SLRSDAVPYL QQPDALYLAL FGLLNLILAP VIPYWNKGSR
HHLQNLVSAL LVLVVVLQTL TLLAPMPVIG GQPAVLVSLL TALIAVVLHL AISFYKSSPS
ASATPSYDMS NRDTGTVKWF NTSKGFGFIS RDSGDDIFVH FRAIRGEGHR VLVEGQRVEF
SVMNRDKGLQ AEDVIAALPR R
//
