ID Q4KCC3_PSEF5 Unreviewed; 749 AA.
AC Q4KCC3;
DT 02-AUG-2005, integrated into UniProtKB/TrEMBL.
DT 02-AUG-2005, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE SubName: Full=Type VI secretion system Vgr family protein {ECO:0000313|EMBL:AAY92276.1};
GN OrderedLocusNames=PFL_3004 {ECO:0000313|EMBL:AAY92276.1};
OS Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=220664 {ECO:0000313|EMBL:AAY92276.1, ECO:0000313|Proteomes:UP000008540};
RN [1] {ECO:0000313|EMBL:AAY92276.1, ECO:0000313|Proteomes:UP000008540}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-477 / NRRL B-23932 / Pf-5
RC {ECO:0000313|Proteomes:UP000008540};
RX PubMed=15980861; DOI=10.1038/nbt1110;
RA Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.,
RA Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J.,
RA Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J.,
RA Gwinn M.L., Zhou L., Schneider D.J., Cartinhour S.W., Nelson W.C.,
RA Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S.III.,
RA Thomashow L.S., Loper J.E.;
RT "Complete genome sequence of the plant commensal Pseudomonas fluorescens
RT Pf-5.";
RL Nat. Biotechnol. 23:873-878(2005).
CC -!- SIMILARITY: Belongs to the VgrG protein family.
CC {ECO:0000256|ARBA:ARBA00005558}.
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DR EMBL; CP000076; AAY92276.1; -; Genomic_DNA.
DR RefSeq; WP_011061292.1; NC_004129.6.
DR AlphaFoldDB; Q4KCC3; -.
DR STRING; 220664.PFL_3004; -.
DR KEGG; pfl:PFL_3004; -.
DR PATRIC; fig|220664.5.peg.3064; -.
DR eggNOG; COG3501; Bacteria.
DR HOGENOM; CLU_004121_3_0_6; -.
DR Proteomes; UP000008540; Chromosome.
DR Gene3D; 2.30.110.50; -; 1.
DR Gene3D; 4.10.220.110; -; 1.
DR Gene3D; 3.55.50.10; Baseplate protein-like domains; 1.
DR Gene3D; 2.40.50.230; Gp5 N-terminal domain; 1.
DR InterPro; IPR006531; Gp5/Vgr_OB.
DR InterPro; IPR010609; Gp5_C.
DR InterPro; IPR017847; T6SS_RhsGE_Vgr_subset.
DR InterPro; IPR006533; T6SS_Vgr_RhsGE.
DR InterPro; IPR037026; Vgr_OB-fold_dom_sf.
DR NCBIfam; TIGR01646; vgr_GE; 1.
DR NCBIfam; TIGR03361; VI_Rhs_Vgr; 1.
DR PANTHER; PTHR32305; -; 1.
DR PANTHER; PTHR32305:SF15; PROTEIN RHSA-RELATED; 1.
DR Pfam; PF06715; Gp5_C; 1.
DR Pfam; PF04717; Phage_base_V; 1.
DR Pfam; PF05954; Phage_GPD; 1.
DR SUPFAM; SSF69255; gp5 N-terminal domain-like; 1.
DR SUPFAM; SSF69349; Phage fibre proteins; 2.
DR SUPFAM; SSF69279; Phage tail proteins; 2.
PE 3: Inferred from homology;
FT DOMAIN 385..453
FT /note="Gp5/Type VI secretion system Vgr protein OB-fold"
FT /evidence="ECO:0000259|Pfam:PF04717"
SQ SEQUENCE 749 AA; 84407 MW; DA52F81C842DF654 CRC64;
MAITQNNRLV QVDSPLGGDV LLLQSMEGNE ELGRLFHYEL DLTSENRAIT FDQLLGKPMG
LTLELHDGSK RYFHGIVCSC RQVNGHGQFA GYRVSLRPWL WLLTRTSDCR IFQNKTVPEI
IKQVFRDLGF SDFEDSLSGN YREWEYCVQY RETSFDFVSR LMEHEGIYYY FRHEQARHVL
VFADAYGAHS TVADYDSVPF YPPDRQMRER DHFYDWQLER EVQPGSLELN DYDFKRPRAR
LEVRSSVSRS HSNGDHPLYD YPGEYVQSND GEHYARTRIE AIHSQFERVQ LRGRARGLGC
GHLFKLTGYE REDQNREYLV VFARYQIRQE LYENAQLDLS EQFTSELDCM DASQAFRPLP
LTPMPIVRGP QTAVVVGPDG EEIWTDQYGR VKVHFYWDRH DQSNANSSCW MRVSQAWAGK
NWGAVQIPRI GQEVIVSFIE GNPDRPIITG RVYNAEQTVP YTLPANATQS GVKSRSSKDG
SPANFNEIRM EDKKGAEQLF IHAEKNQDIE VENDETHWVG HDRSKTIDND ETVHVKHDRT
ETVDHNETIT IGVNRTESVG NNEDISIGVN RTESVGSNET ISIGLNRTIS VGASETATVA
LQRTHAVGIN ETIAIGAAQE VVIGAFQTVN VGAYQNVNVG LYQSTNVGTN RSVDVGANLS
TTVKDNESRQ VGAGRTTDIG KDDELTVGKN LVIDAGDSVT IMTGKASIVM KKDGTISISG
KDITIDGSGV INIKANKNVV IKGRKILQN
//
