ID Q4KH39_PSEF5 Unreviewed; 280 AA.
AC Q4KH39;
DT 02-AUG-2005, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 2.
DT 27-MAR-2024, entry version 112.
DE SubName: Full=Pca regulon regulatory protein PcaR {ECO:0000313|EMBL:AAY90600.2};
GN Name=pcaR {ECO:0000313|EMBL:AAY90600.2};
GN OrderedLocusNames=PFL_1315 {ECO:0000313|EMBL:AAY90600.2};
OS Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=220664 {ECO:0000313|EMBL:AAY90600.2, ECO:0000313|Proteomes:UP000008540};
RN [1] {ECO:0000313|EMBL:AAY90600.2, ECO:0000313|Proteomes:UP000008540}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-477 / NRRL B-23932 / Pf-5
RC {ECO:0000313|Proteomes:UP000008540};
RX PubMed=15980861; DOI=10.1038/nbt1110;
RA Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.,
RA Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J.,
RA Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J.,
RA Gwinn M.L., Zhou L., Schneider D.J., Cartinhour S.W., Nelson W.C.,
RA Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S.III.,
RA Thomashow L.S., Loper J.E.;
RT "Complete genome sequence of the plant commensal Pseudomonas fluorescens
RT Pf-5.";
RL Nat. Biotechnol. 23:873-878(2005).
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DR EMBL; CP000076; AAY90600.2; -; Genomic_DNA.
DR RefSeq; WP_011059657.1; NC_004129.6.
DR AlphaFoldDB; Q4KH39; -.
DR STRING; 220664.PFL_1315; -.
DR GeneID; 57474334; -.
DR KEGG; pfl:PFL_1315; -.
DR PATRIC; fig|220664.5.peg.1348; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_0_1_6; -.
DR Proteomes; UP000008540; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046278; P:3,4-dihydroxybenzoate metabolic process; IEA:InterPro.
DR GO; GO:0045893; P:positive regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR012794; PcaR_PcaU.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR02431; pcaR_pcaU; 1.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF34; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 34..94
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 95..280
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 280 AA; 30663 MW; EC503A55D884F065 CRC64;
MNDQMRNSFT SVAPPIVASA AKRIQALTGD PDFMTSLARG LAVVQAFQER KRHLTIAQIS
HRTEIPRAAV RRCLHTLIKL GYATTDGRTY SLLPKVLTLG HAYLSSTPLA VSAQPYLDRM
SEQLHEACNM ATLEGDDILY IARSATTQRL ISVDLSVGGR LPAYCTSMGR ILLAALDDSS
LHEYLDHADL QAKTSRTLHT PEALLECLQQ VRQQGWCIVD QELEQGLRSI AVPVYDASGQ
VLAALNVSTH AGRVSRAELE QRFLPGLLSA SRDLSAQLFA
//
