ID Q5E2J2_ALIF1 Unreviewed; 220 AA.
AC Q5E2J2;
DT 15-MAR-2005, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2005, sequence version 1.
DT 27-MAR-2024, entry version 109.
DE SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AAW86754.1};
GN Name=csiR {ECO:0000313|EMBL:AAW86754.1};
GN OrderedLocusNames=VF_2259 {ECO:0000313|EMBL:AAW86754.1};
OS Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=312309 {ECO:0000313|EMBL:AAW86754.1, ECO:0000313|Proteomes:UP000000537};
RN [1] {ECO:0000313|EMBL:AAW86754.1, ECO:0000313|Proteomes:UP000000537}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700601 / ES114 {ECO:0000313|Proteomes:UP000000537};
RX PubMed=15703294; DOI=10.1073/pnas.0409900102;
RA Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R.,
RA Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E.,
RA Stevens A., Visick K., Whistler C., Greenberg E.P.;
RT "Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with
RT pathogenic congeners.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005).
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DR EMBL; CP000020; AAW86754.1; -; Genomic_DNA.
DR RefSeq; WP_011262673.1; NC_006840.2.
DR RefSeq; YP_205642.1; NC_006840.2.
DR AlphaFoldDB; Q5E2J2; -.
DR STRING; 312309.VF_2259; -.
DR EnsemblBacteria; AAW86754; AAW86754; VF_2259.
DR KEGG; vfi:VF_2259; -.
DR PATRIC; fig|312309.11.peg.2297; -.
DR eggNOG; COG1802; Bacteria.
DR HOGENOM; CLU_017584_5_3_6; -.
DR OrthoDB; 9799812at2; -.
DR Proteomes; UP000000537; Chromosome I.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF20; HTH-TYPE TRANSCRIPTIONAL REPRESSOR GLAR; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:AAW86754.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000537};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 4..71
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 220 AA; 25512 MW; 880E76B36EC68B7A CRC64;
MSSLTLTDKV SKMIHQDILS GKLKPGQKLV VAELKERYNV GASPIREALV QLSWNKYVKL
EPQKGCWVAS ISLSELKELF ESLRTIGQVL LAKAITNGNE NWELNVLTSF HKLNKINLQD
AKIEELREWE NRYTDFHNSL LEGAQSPIMY QFYQDISHQI TRYRHLNNNP QVISETYAQY
LEEHEIMMKL TLSRDSEQAI KYLNNHYSKA SDLISTYFSA
//
