ID Q5I7K7_WHEAT Unreviewed; 51 AA.
AC Q5I7K7;
DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 92.
DE SubName: Full=Ribosomal protein L39 {ECO:0000313|EMBL:AAW50988.1, ECO:0000313|EnsemblPlants:TraesCS6A02G360400.1};
GN ORFNames=CFC21_061075 {ECO:0000313|EMBL:KAF7053079.1}, CFC21_071752
GN {ECO:0000313|EMBL:KAF7065670.1}, CFC21_085024
GN {ECO:0000313|EMBL:KAF7081044.1}, CFC21_089802
GN {ECO:0000313|EMBL:KAF7086516.1}, CFC21_094271
GN {ECO:0000313|EMBL:KAF7091716.1}, CFC21_096449
GN {ECO:0000313|EMBL:KAF7094105.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EMBL:AAW50988.1};
RN [1] {ECO:0000313|EMBL:AAW50988.1}
RP NUCLEOTIDE SEQUENCE.
RA Yao Y.Y., Ni Z.F., Sun Q.X.;
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AAW50988.1}
RP NUCLEOTIDE SEQUENCE.
RX AGRICOLA=IND43813201; DOI=10.1016/j.plantsci.2005.10.012;
RA Yao Y.Y., Ni Z.F., Du J., Wang X., Wu H., Sun Q.X.;
RT "Isolation and characterization of 15 genes encoding ribosomal proteins in
RT wheat (Triticum aestivum L.).";
RL Plant Sci. 170:579-586(2006).
RN [3] {ECO:0007829|PDB:4V3P}
RP STRUCTURE BY ELECTRON MICROSCOPY (34.00 ANGSTROMS).
RX PubMed=25376914; DOI=10.1038/ncomms6294;
RA Myasnikov A.G., Afonina Z.A., Menetret J.F., Shirokov V.A., Spirin A.S.,
RA Klaholz B.P.;
RT "The molecular structure of the left-handed supra-molecular helix of
RT eukaryotic polyribosomes.";
RL Nat. Commun. 5:5294-5294(2014).
RN [4] {ECO:0007829|PDB:4V7E}
RP STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
RX PubMed=24499919; DOI=10.1038/nature12950;
RA Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C.,
RA Berninghausen O., Beckmann R.;
RT "Structures of the Sec61 complex engaged in nascent peptide translocation
RT or membrane insertion.";
RL Nature 506:107-110(2014).
RN [5] {ECO:0000313|EMBL:KAF7053079.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7053079.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [6] {ECO:0000313|EnsemblPlants:TraesCS6A02G360400.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS6A02G360400.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [7] {ECO:0000313|EnsemblPlants:TraesCS6A02G360400.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [8] {ECO:0000313|EMBL:KAF7053079.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7053079.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL39 family.
CC {ECO:0000256|ARBA:ARBA00009339}.
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DR EMBL; AY846827; AAW50988.1; -; mRNA.
DR EMBL; CM022222; KAF7053079.1; -; Genomic_DNA.
DR EMBL; CM022224; KAF7065670.1; -; Genomic_DNA.
DR EMBL; CM022226; KAF7081044.1; -; Genomic_DNA.
DR EMBL; CM022227; KAF7086516.1; -; Genomic_DNA.
DR EMBL; CM022228; KAF7091716.1; -; Genomic_DNA.
DR EMBL; CM022229; KAF7094105.1; -; Genomic_DNA.
DR PDB; 4V3P; EM; 34.00 A; Lo=1-51.
DR PDB; 4V7E; EM; 5.50 A; Cl=1-51.
DR PDBsum; 4V3P; -.
DR PDBsum; 4V7E; -.
DR SMR; Q5I7K7; -.
DR STRING; 4565.Q5I7K7; -.
DR PaxDb; 4565-Traes_6AL_E9A292FCD-1; -.
DR EnsemblPlants; TraesCS6A02G360400.1; TraesCS6A02G360400.1; TraesCS6A02G360400.
DR EnsemblPlants; TraesCS6B02G393300.1; TraesCS6B02G393300.1; TraesCS6B02G393300.
DR EnsemblPlants; TraesCS6D02G343900.1; TraesCS6D02G343900.1; TraesCS6D02G343900.
DR EnsemblPlants; TraesCS7A02G145700.1; TraesCS7A02G145700.1; TraesCS7A02G145700.
DR EnsemblPlants; TraesCS7D02G147000.1; TraesCS7D02G147000.1; TraesCS7D02G147000.
DR Gramene; TraesCS6A02G360400.1; TraesCS6A02G360400.1; TraesCS6A02G360400.
DR Gramene; TraesCS6A03G0923700.1; TraesCS6A03G0923700.1.CDS; TraesCS6A03G0923700.
DR Gramene; TraesCS6B02G393300.1; TraesCS6B02G393300.1; TraesCS6B02G393300.
DR Gramene; TraesCS6B03G1110700.1; TraesCS6B03G1110700.1.CDS; TraesCS6B03G1110700.
DR Gramene; TraesCS6D02G343900.1; TraesCS6D02G343900.1; TraesCS6D02G343900.
DR Gramene; TraesCS6D03G0796600.1; TraesCS6D03G0796600.1.CDS; TraesCS6D03G0796600.
DR Gramene; TraesCS7A02G145700.1; TraesCS7A02G145700.1; TraesCS7A02G145700.
DR Gramene; TraesCS7A03G0341700.1; TraesCS7A03G0341700.1.CDS; TraesCS7A03G0341700.
DR Gramene; TraesCS7D02G147000.1; TraesCS7D02G147000.1; TraesCS7D02G147000.
DR Gramene; TraesCS7D03G0329600.1; TraesCS7D03G0329600.1.CDS; TraesCS7D03G0329600.
DR Gramene; TraesRN6A0100909200.1; TraesRN6A0100909200.1; TraesRN6A0100909200.
DR Gramene; TraesRN6B0101088000.1; TraesRN6B0101088000.1; TraesRN6B0101088000.
DR Gramene; TraesRN6D0100842700.1; TraesRN6D0100842700.1; TraesRN6D0100842700.
DR eggNOG; KOG0002; Eukaryota.
DR OMA; FRIKMKL; -.
DR OrthoDB; 166246at2759; -.
DR Proteomes; UP000019116; Chromosome 6A.
DR Proteomes; UP000019116; Chromosome 6B.
DR Proteomes; UP000019116; Chromosome 6D.
DR Proteomes; UP000019116; Chromosome 7A.
DR Proteomes; UP000019116; Chromosome 7D.
DR Proteomes; UP000815260; Chromosome 4D.
DR Proteomes; UP000815260; Chromosome 5B.
DR Proteomes; UP000815260; Chromosome 6A.
DR Proteomes; UP000815260; Chromosome 6B.
DR Proteomes; UP000815260; Chromosome 6D.
DR Proteomes; UP000815260; Chromosome 7A.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 1.10.1620.10; Ribosomal protein L39e; 1.
DR HAMAP; MF_00629; Ribosomal_L39e; 1.
DR InterPro; IPR000077; Ribosomal_eL39.
DR InterPro; IPR020083; Ribosomal_eL39_CS.
DR InterPro; IPR023626; Ribosomal_eL39_dom_sf.
DR PANTHER; PTHR19970:SF24; 60S RIBOSOMAL PROTEIN L39; 1.
DR PANTHER; PTHR19970; RIBOSOMAL PROTEIN L39E; 1.
DR Pfam; PF00832; Ribosomal_L39; 1.
DR SUPFAM; SSF48662; Ribosomal protein L39e; 1.
DR PROSITE; PS00051; RIBOSOMAL_L39E; 1.
PE 1: Evidence at protein level;
KW 3D-structure {ECO:0007829|PDB:4V3P, ECO:0007829|PDB:4V7E};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000313|EMBL:AAW50988.1}.
SQ SEQUENCE 51 AA; 6510 MW; 534B81E1E70FC2D6 CRC64;
MPSHKTFRIK QKLAKKQRQN RPIPYWIRMR TDNTIRYNAK RRHWRRTKLG F
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