ID Q5JFN0_THEKO Unreviewed; 420 AA.
AC Q5JFN0;
DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE SubName: Full=snoRNP component, Nop56p/58p homolog {ECO:0000313|EMBL:BAD84373.1};
GN OrderedLocusNames=TK0184 {ECO:0000313|EMBL:BAD84373.1};
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014 {ECO:0000313|EMBL:BAD84373.1, ECO:0000313|Proteomes:UP000000536};
RN [1] {ECO:0000313|EMBL:BAD84373.1, ECO:0000313|Proteomes:UP000000536}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1
RC {ECO:0000313|Proteomes:UP000000536};
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- SIMILARITY: Belongs to the NOP5/NOP56 family.
CC {ECO:0000256|ARBA:ARBA00009211}.
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DR EMBL; AP006878; BAD84373.1; -; Genomic_DNA.
DR RefSeq; WP_011249139.1; NC_006624.1.
DR AlphaFoldDB; Q5JFN0; -.
DR STRING; 69014.TK0184; -.
DR EnsemblBacteria; BAD84373; BAD84373; TK0184.
DR GeneID; 78446688; -.
DR KEGG; tko:TK0184; -.
DR PATRIC; fig|69014.16.peg.184; -.
DR eggNOG; arCOG01923; Archaea.
DR HOGENOM; CLU_015495_1_0_2; -.
DR InParanoid; Q5JFN0; -.
DR OrthoDB; 11877at2157; -.
DR PhylomeDB; Q5JFN0; -.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0031428; C:box C/D RNP complex; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0030515; F:snoRNA binding; IBA:GO_Central.
DR Gene3D; 1.10.150.460; -; 1.
DR Gene3D; 3.30.420.220; -; 1.
DR Gene3D; 1.10.287.660; Helix hairpin bin; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR029012; Helix_hairpin_bin_sf.
DR InterPro; IPR045056; Nop56/Nop58.
DR InterPro; IPR048896; Nop5_56-rel_N.
DR InterPro; IPR047099; Nop5_N_sf.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR PANTHER; PTHR10894; NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58; 1.
DR PANTHER; PTHR10894:SF0; NUCLEOLAR PROTEIN 56; 1.
DR Pfam; PF01798; Nop; 1.
DR Pfam; PF21572; Nop5_56-rel_N_Arc; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000536}.
FT DOMAIN 252..367
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 365..420
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..420
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 420 AA; 47231 MW; 12B6328B95347556 CRC64;
MKAYIAENVR GIYAFDESGK LIGSKPFSGK PEVSLDKLLK GEPSDELIEF LDELGSEGYT
EFVVEDSELS RNLKELGYNA TAEFPNIAGE KLRSSPEEFL GENWFDEYFS VGVALTRLRI
QEQSGARDKM IIQAIEALDD IDKVINLLVS RLREWYGLHF PELDELLPKH PQYVAFVKEI
GPRENATREK LEKLGFSEGK IEKILEAAEK SMGAPLGKFD SAIIQKLASE IHDLYKLREQ
IEDYLETAMD EVAPNLKALV GAKLAARLMS LAGGLKELAM MPASTIQVLG AEKALFRHLR
TGAKPPKHGV IFQYPAINRS PWWQRGKIAR ALAGKLAIAA RVDYFSGEYI GEELKKELEQ
RIQEIKEKYP NPPKRKAKPE KKKKEKKKFK GKGKGKHEKG KGFGGKKDKK KKKKGKGGKR
//
