ID Q5LDK3_BACFN Unreviewed; 416 AA.
AC Q5LDK3;
DT 21-JUN-2005, integrated into UniProtKB/TrEMBL.
DT 21-JUN-2005, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=Bacteriophage integrase {ECO:0000313|EMBL:CAH07806.1};
GN ORFNames=BF9343_2025 {ECO:0000313|EMBL:CAH07806.1};
OS Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019
OS / NCTC 9343 / Onslow).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=272559 {ECO:0000313|EMBL:CAH07806.1, ECO:0000313|Proteomes:UP000006731};
RN [1] {ECO:0000313|EMBL:CAH07806.1, ECO:0000313|Proteomes:UP000006731}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 /
RC Onslow {ECO:0000313|Proteomes:UP000006731};
RX PubMed=15746427; DOI=10.1126/science.1107008;
RA Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V.,
RA Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A.,
RA Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A.,
RA Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J.,
RA Barrell B.G., Parkhill J.;
RT "Extensive DNA inversions in the B. fragilis genome control variable gene
RT expression.";
RL Science 307:1463-1465(2005).
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DR EMBL; CR626927; CAH07806.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5LDK3; -.
DR PaxDb; 272559-BF9343_2025; -.
DR KEGG; bfs:BF9343_2025; -.
DR eggNOG; COG4974; Bacteria.
DR HOGENOM; CLU_033139_2_0_10; -.
DR Proteomes; UP000006731; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd01185; INTN1_C_like; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR035386; Arm-DNA-bind_5.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR025269; SAM-like_dom.
DR Pfam; PF17293; Arm-DNA-bind_5; 1.
DR Pfam; PF13102; Phage_int_SAM_5; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006731}.
FT DOMAIN 232..410
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 416 AA; 48681 MW; 1CFDB1E8C3AD478F CRC64;
MYHLKKQRIM GAVKRNTLSV LFIIKKAKLL KNGEAPVCMR ITVNKRVAEV MIKRSIPVDL
WNQKKECSKG KDRVAIELNH YINTVRAKVL QIHRELEIDN KPITADIIKD CFYGRDKVQR
SLQEVYKEHN EKCRALIGKE YTESTVIKFD TSINRLKEYI RSCYHRDDIM LAELDGQFIR
DFDFWLKTEK HCQNNSALKH LKNLKKVVRI ALANDWIKKD PFYGIHFKQE EVNVEFLSRE
ELDILMNKEF AIKRLEQVRD IFVFCCFTAL AFVDVQQLSR EHLIKDNSGA LWIRKARQKT
NQMCNIPVLS IPQRILRKYE DNAECIKKGV LLPVISNQRM NAYLKEIADL CGITKRLTTH
VARHTAATIV FLANDVSMEN VSKILGHSNI RMTQHYAKVL DSSIMRDMVN VEKNFK
//
