ID Q5LLB5_RUEPO Unreviewed; 724 AA.
AC Q5LLB5;
DT 01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 01-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=Indolepyruvate oxidoreductase, IorA subunit, putative {ECO:0000313|EMBL:AAV97248.1};
GN OrderedLocusNames=SPOA0111 {ECO:0000313|EMBL:AAV97248.1};
OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter
OS pomeroyi).
OG Plasmid megaplasmid Spo {ECO:0000313|Proteomes:UP000001023}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV97248.1, ECO:0000313|Proteomes:UP000001023};
RN [1] {ECO:0000313|EMBL:AAV97248.1, ECO:0000313|Proteomes:UP000001023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RC PLASMID=Plasmid megaplasmid Spo {ECO:0000313|Proteomes:UP000001023};
RX PubMed=15602564; DOI=10.1038/nature03170;
RA Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M.,
RA Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q.,
RA Daugherty S.C., Deboy R.T., Dodson R.J., Durkin A.S., Madupu R.,
RA Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.;
RT "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine
RT environment.";
RL Nature 432:910-913(2004).
RN [2] {ECO:0000313|EMBL:AAV97248.1, ECO:0000313|Proteomes:UP000001023}
RP GENOME REANNOTATION.
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RC PLASMID=Plasmid megaplasmid Spo {ECO:0000313|Proteomes:UP000001023};
RX PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA Rivers A.R., Smith C.B., Moran M.A.;
RT "An updated genome annotation for the model marine bacterium Ruegeria
RT pomeroyi DSS-3.";
RL Stand. Genomic Sci. 9:11-11(2014).
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DR EMBL; CP000032; AAV97248.1; -; Genomic_DNA.
DR RefSeq; WP_011241894.1; NC_006569.1.
DR AlphaFoldDB; Q5LLB5; -.
DR PaxDb; 246200-SPOA0111; -.
DR KEGG; sil:SPOA0111; -.
DR eggNOG; COG4231; Bacteria.
DR HOGENOM; CLU_017727_0_0_5; -.
DR OrthoDB; 9804603at2; -.
DR Proteomes; UP000001023; Plasmid megaplasmid Spo.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR CDD; cd02008; TPP_IOR_alpha; 1.
DR CDD; cd07034; TPP_PYR_PFOR_IOR-alpha_like; 1.
DR Gene3D; 3.40.50.970; -; 2.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR045025; HACL1-like.
DR InterPro; IPR002880; Pyrv_Fd/Flavodoxin_OxRdtase_N.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR011766; TPP_enzyme_TPP-bd.
DR PANTHER; PTHR43710; 2-HYDROXYACYL-COA LYASE; 1.
DR PANTHER; PTHR43710:SF5; INDOLEPYRUVATE FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT; 1.
DR Pfam; PF02775; TPP_enzyme_C; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
DR PROSITE; PS51379; 4FE4S_FER_2; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:AAV97248.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT DOMAIN 617..649
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 724 AA; 78272 MW; 09BFB60AE25EA74D CRC64;
MAERSFAKEV EHLKLGEGDV FRGEGILAIT KALLQSGISY VGGYQGSPIS HLMDVLADAN
DILDDLGVNF QSSANEATAG AMLSASVMYP LRGAVAWKST VGTNVASDAL ANLASGGVTG
GAMVIVGEDY GEGSSIMQER THAFAMKSQM WLLDPRPDQE CMVGLIEKGF ELSEASNTPV
LLQVRVRSCH MTGEFVCKDN VRPDFTLKDA MNSPKRDLDR IVLPPAAYEH EVEKIERRLP
AAIDFVTENK LNEFFGPTGK DKSGKTGLIV QGGMYNSTIR ALQFLGLSDA YGNSKLPIYV
MNVCYPTIPS EIEAFCEGLD AVLVVEEGQP EFIEQSITTN ISRLRKPTEV HGKKYLPMAG
DYTVTALTKG IGQFLEDYEA SLLGNRAPAP DPVPILTNPA VAALKDVVPP RPPGLCTGCP
ERPIFTAMKL VFEELGEHHV SADIGCHLFS ILPPFNIGAT TMGYGLGAAS SAAFNVKGAK
RSISIMGDGG FWHNGLTSGI GHAVFNKHDG VFLIIDNYYS SATGGQDILS SRAFNKRRTT
NNSIVDAVKG VGAKWVRQID RTYDVNRMRA VLIEALTTDA EGPKIIVASS ECMLNKQRRV
KPQVAKALKA GKRTVKERFG VDEDVCTGDH ACIRLSGCPS LSVKELDDPL RDDPVASIDT
TCVACGNCGE VADAAVLCPS FYRAEVIHNP SSWDRFKSSF TLPAITYLQK RRARRAVNFE
EAAR
//
