ID Q5LMP1_RUEPO Unreviewed; 475 AA.
AC Q5LMP1;
DT 01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 01-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 103.
DE SubName: Full=Iron-sulfur-binding protein, RdxA/RdxB/FixG family {ECO:0000313|EMBL:AAV96747.1};
GN OrderedLocusNames=SPO3522 {ECO:0000313|EMBL:AAV96747.1};
OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter
OS pomeroyi).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV96747.1, ECO:0000313|Proteomes:UP000001023};
RN [1] {ECO:0000313|EMBL:AAV96747.1, ECO:0000313|Proteomes:UP000001023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=15602564; DOI=10.1038/nature03170;
RA Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M.,
RA Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q.,
RA Daugherty S.C., Deboy R.T., Dodson R.J., Durkin A.S., Madupu R.,
RA Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.;
RT "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine
RT environment.";
RL Nature 432:910-913(2004).
RN [2] {ECO:0000313|EMBL:AAV96747.1, ECO:0000313|Proteomes:UP000001023}
RP GENOME REANNOTATION.
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA Rivers A.R., Smith C.B., Moran M.A.;
RT "An updated genome annotation for the model marine bacterium Ruegeria
RT pomeroyi DSS-3.";
RL Stand. Genomic Sci. 9:11-11(2014).
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DR EMBL; CP000031; AAV96747.1; -; Genomic_DNA.
DR RefSeq; WP_011049202.1; NC_003911.12.
DR AlphaFoldDB; Q5LMP1; -.
DR STRING; 246200.SPO3522; -.
DR PaxDb; 246200-SPO3522; -.
DR KEGG; sil:SPO3522; -.
DR eggNOG; COG0348; Bacteria.
DR HOGENOM; CLU_032118_0_0_5; -.
DR OrthoDB; 9811700at2; -.
DR Proteomes; UP000001023; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.1060.10; Alpha-helical ferredoxin; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR014116; Cyt_c_oxidase_cbb3_FixG.
DR InterPro; IPR032879; FixG_C.
DR InterPro; IPR009051; Helical_ferredxn.
DR InterPro; IPR013783; Ig-like_fold.
DR NCBIfam; TIGR02745; ccoG_rdxA_fixG; 1.
DR PANTHER; PTHR30176; FERREDOXIN-TYPE PROTEIN NAPH; 1.
DR PANTHER; PTHR30176:SF3; FERREDOXIN-TYPE PROTEIN NAPH; 1.
DR Pfam; PF13746; Fer4_18; 1.
DR Pfam; PF12801; Fer4_5; 1.
DR Pfam; PF11614; FixG_C; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Electron transport {ECO:0000256|ARBA:ARBA00022982};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 29..47
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 81..98
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 155..174
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 190..210
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 338..357
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 249..279
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 475 AA; 54104 MW; 3F8903E716B92C88 CRC64;
MSESTPEPSL YAAREPIFPR RVSGTFRNLK WVIMAVTLGI YYLTPWIRWD RGPSLPDQAV
LLDMANRRFY FFWIEIWPHE FYFVAGLLIM AGLGLFLFTS ALGRVWCGYA CPQTVWTDLF
ILVERWIEGD RNARLRLHRQ EKLDFRKARL RITKWAAWLL IGLATGGAWI FYFADAPTLL
SDLVTGNAHP IAYTTMAVLT FTTFFFGGFA REQICIYACP WPRIQAAMMD EDTLVVGYRE
WRGEPRGKGK RTEDSELGDC IDCMACVNVC PVGIDIRDGQ QLECITCALC IDACDDMMEK
IGKPRGLIDY MALKDEEAER AGHPPKNIWK HILRPRTIMY TSLWSLVGFG LLFALFIRSD
IDLTVAPVRN PTFVTLSDGS IRNTYDVRLR NKHGEERPFQ LSVVGDPSMR IELEGLPDEN
VSVPADTAFL QRVYIVTPKD AAPSQAASTD VRIWVEDQSN GERAYKDTTF NGRGN
//
