ID Q5LQB2_RUEPO Unreviewed; 265 AA.
AC Q5LQB2;
DT 01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 01-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE SubName: Full=DNA-binding protein, putative {ECO:0000313|EMBL:AAV95829.1};
GN OrderedLocusNames=SPO2581 {ECO:0000313|EMBL:AAV95829.1};
OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter
OS pomeroyi).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV95829.1, ECO:0000313|Proteomes:UP000001023};
RN [1] {ECO:0000313|EMBL:AAV95829.1, ECO:0000313|Proteomes:UP000001023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=15602564; DOI=10.1038/nature03170;
RA Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M.,
RA Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q.,
RA Daugherty S.C., Deboy R.T., Dodson R.J., Durkin A.S., Madupu R.,
RA Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.;
RT "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine
RT environment.";
RL Nature 432:910-913(2004).
RN [2] {ECO:0000313|EMBL:AAV95829.1, ECO:0000313|Proteomes:UP000001023}
RP GENOME REANNOTATION.
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA Rivers A.R., Smith C.B., Moran M.A.;
RT "An updated genome annotation for the model marine bacterium Ruegeria
RT pomeroyi DSS-3.";
RL Stand. Genomic Sci. 9:11-11(2014).
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DR EMBL; CP000031; AAV95829.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5LQB2; -.
DR STRING; 246200.SPO2581; -.
DR PaxDb; 246200-SPO2581; -.
DR KEGG; sil:SPO2581; -.
DR eggNOG; ENOG502Z8GI; Bacteria.
DR HOGENOM; CLU_1102125_0_0_5; -.
DR Proteomes; UP000001023; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF13443; HTH_26; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:AAV95829.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT DOMAIN 28..72
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 265 AA; 31062 MW; 597C3C67273E996B CRC64;
MTKTTRTPAE LRNMFGENLR RLSRRYPSIS ELSRQLGINR TQFNRYLSGE SFPRPDVLDR
ICNFFDVDAR ILLDPVDAIP ASDQILSGPA LAEFFGPDVT RLDEDDFPSG FYRFTRRSFV
SERKFVLGLV YVFRENNATY IRGYEALEAM RQQDLPDDPR TREFRGYVTR EDDGVTLLIS
RRNAMTFSFN YLSRVASFEN NFWVGYVSRS VREPVSGHRI TRMVYEHLGR DRSAIWKTAR
QAGFIDAEDL LPFHRRLLRP DEPFR
//
