ID Q5LSM9_RUEPO Unreviewed; 394 AA.
AC Q5LSM9;
DT 01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 01-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=Dehalogenase, putative {ECO:0000313|EMBL:AAV95018.1};
GN OrderedLocusNames=SPO1738 {ECO:0000313|EMBL:AAV95018.1};
OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter
OS pomeroyi).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV95018.1, ECO:0000313|Proteomes:UP000001023};
RN [1] {ECO:0000313|EMBL:AAV95018.1, ECO:0000313|Proteomes:UP000001023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=15602564; DOI=10.1038/nature03170;
RA Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M.,
RA Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q.,
RA Daugherty S.C., Deboy R.T., Dodson R.J., Durkin A.S., Madupu R.,
RA Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.;
RT "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine
RT environment.";
RL Nature 432:910-913(2004).
RN [2] {ECO:0000313|EMBL:AAV95018.1, ECO:0000313|Proteomes:UP000001023}
RP GENOME REANNOTATION.
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA Rivers A.R., Smith C.B., Moran M.A.;
RT "An updated genome annotation for the model marine bacterium Ruegeria
RT pomeroyi DSS-3.";
RL Stand. Genomic Sci. 9:11-11(2014).
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DR EMBL; CP000031; AAV95018.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5LSM9; -.
DR STRING; 246200.SPO1738; -.
DR PaxDb; 246200-SPO1738; -.
DR KEGG; sil:SPO1738; -.
DR eggNOG; COG1600; Bacteria.
DR HOGENOM; CLU_036586_2_0_5; -.
DR Proteomes; UP000001023; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.70.20; -; 1.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR028894; RDH_dom.
DR PANTHER; PTHR42827:SF1; IRON-SULFUR CLUSTER BINDING PROTEIN; 1.
DR PANTHER; PTHR42827; IRON-SULFUR CLUSTER-BINDING PROTEIN-RELATED; 1.
DR Pfam; PF13486; Dehalogenase; 1.
DR Pfam; PF13484; Fer4_16; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 278..307
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 394 AA; 43875 MW; 9D79E904281777D1 CRC64;
MTAMSYPANR PDRTRPTDTA AGIETTEAFE RFAQRNDVFT RAMWDPQVRS KQTDAFFASY
RMEAAPRRGD GFTQRDFALR NAAWLISDVV TNRFAAEGRR EGFQAPISYD TPVAPQQVGV
DDPAAMSAEI KRIARFFGAD LCGVTELDER WHYTARVDTR DMSEAPLGLP DGLTSVIVLG
HEMERDLVAT YPSALAGAAT GREYSHEAAV VMQLATYIRN LGYEAVASMN DTGLVIPYAV
KAGLGEYARN QMVITPEFGP RLRFSKVFTN LPLAHDVPRP RGVRAFCDIC TACADACPVK
ALPYGPPSDV APNVSAIRGV RKWTSDAEKC FGFWAKLASD CAICMRVCPF NRDYARRRNR
LWLRLALSPL RHLALRLARG HGKRRKPAEW WAGT
//
