ID Q5UDB6_MAIZE Unreviewed; 588 AA.
AC Q5UDB6;
DT 07-DEC-2004, integrated into UniProtKB/TrEMBL.
DT 07-DEC-2004, sequence version 1.
DT 27-MAR-2024, entry version 111.
DE SubName: Full=INDETERMINATE-related protein 9 {ECO:0000313|EMBL:AAV51392.1};
DE SubName: Full=Naked endosperm1 {ECO:0000313|EMBL:ONM14947.1};
GN Name=542199 {ECO:0000313|EnsemblPlants:Zm00001eb073830_P001};
GN ORFNames=ZEAMMB73_Zm00001d002654 {ECO:0000313|EMBL:ONM14947.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:AAV51392.1};
RN [1] {ECO:0000313|EMBL:AAV51392.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Vegetative apex {ECO:0000313|EMBL:AAV51392.1};
RX PubMed=16784536; DOI=10.1186/1471-2164-7-158;
RA Colasanti J., Tremblay R., Wong A.Y., Coneva V., Kozaki A., Mable B.K.;
RT "The maize INDETERMINATE1 flowering time regulator defines a highly
RT conserved zinc finger protein family in higher plants.";
RL BMC Genomics 7:158-158(2006).
RN [2] {ECO:0000313|EMBL:ACN28817.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACN28817.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [3] {ECO:0000313|EMBL:ONM14947.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb073830_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM14947.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:Zm00001eb073830_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb073830_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; AY754866; AAV51392.1; -; mRNA.
DR EMBL; BT064120; ACN28817.1; -; mRNA.
DR EMBL; CM007648; ONM14947.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM14949.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM14952.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM14953.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM14955.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM14962.1; -; Genomic_DNA.
DR RefSeq; NP_001105283.1; NM_001111813.1.
DR RefSeq; XP_008668633.1; XM_008670411.1.
DR RefSeq; XP_008668634.1; XM_008670412.1.
DR RefSeq; XP_008668635.1; XM_008670413.1.
DR RefSeq; XP_008668636.1; XM_008670414.1.
DR AlphaFoldDB; Q5UDB6; -.
DR PaxDb; 4577-GRMZM2G129261_P01; -.
DR EnsemblPlants; Zm00001eb073830_T001; Zm00001eb073830_P001; Zm00001eb073830.
DR EnsemblPlants; Zm00001eb073830_T002; Zm00001eb073830_P002; Zm00001eb073830.
DR EnsemblPlants; Zm00001eb073830_T003; Zm00001eb073830_P003; Zm00001eb073830.
DR GeneID; 542199; -.
DR Gramene; Zm00001eb073830_T001; Zm00001eb073830_P001; Zm00001eb073830.
DR Gramene; Zm00001eb073830_T002; Zm00001eb073830_P002; Zm00001eb073830.
DR Gramene; Zm00001eb073830_T003; Zm00001eb073830_P003; Zm00001eb073830.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_014578_3_0_1; -.
DR OrthoDB; 5363046at2759; -.
DR Proteomes; UP000007305; Chromosome 2.
DR ExpressionAtlas; Q5UDB6; baseline and differential.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR InterPro; IPR031140; IDD1-16.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10593:SF127; OS04G0566400 PROTEIN; 1.
DR PANTHER; PTHR10593; SERINE/THREONINE-PROTEIN KINASE RIO; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q5UDB6};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 84..106
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 36..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 554..588
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 373..391
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 559..578
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 588 AA; 61136 MW; 29AC91CAEA907E24 CRC64;
MASNSSAAFF GVRDGDQQDQ IKPLISPQQQ LAAALPGVAG GVPAASGQGA PPAQPPPKKK
RTMPDPDAEV IALSPKTLMA TNRFVCEVCN KGFQREQNLQ LHRRGHNLPW KLKQKNPLQA
QRRRVYLCPE PTCVHHDPAR ALGDLTGIKK HFCRKHGEKK WKCDKCSKRY AVQSDWKAHS
KICGTREYRC DCGTLFSRRD SFITHRAFCD ALAQESARLP PTSLSSLTSH LYGATSTGNM
ALSLSQVGSH LTSTLQDGHH HHPSAELLRL GATAGGGSSI AARLDHLLSP NGASAFRPPQ
GPPSSASFFL NAGASVGPDF GDDVGNGPHS FLQGNKPFHG LMQLPDLQGN GAGGPGGSGP
SLFNLSFFAN NGNSSGSSHE HASQGLMNNN DHFNGGAGGG GGGSEASEAG IFGGNFVGGG
DQVPPPGLYS DQASMLPQMS ATALLQKAAQ MGATSSANGG AASMFRGFVG SSPHVRPATP
HMEQSDANLN DLMNSLAGGG VGAGGMFGSS NGAGGPGMFD PRQLCDMEHE VKFGHGGGDM
TRDFLGVGGG GIVRGISTPR GDHQSSSDMS SLEAEMKSAS SFNGGRMP
//
