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Database: UniProt
Entry: Q5W6V8_ORYSJ
LinkDB: Q5W6V8_ORYSJ
Original site: Q5W6V8_ORYSJ 
ID   Q5W6V8_ORYSJ            Unreviewed;       247 AA.
AC   Q5W6V8;
DT   07-DEC-2004, integrated into UniProtKB/TrEMBL.
DT   07-DEC-2004, sequence version 1.
DT   31-JUL-2019, entry version 98.
DE   SubName: Full=Os05g0318300 protein {ECO:0000313|EMBL:BAF17096.1};
DE   SubName: Full=cDNA clone:001-202-H01, full insert sequence {ECO:0000313|EMBL:BAG97365.1};
GN   OrderedLocusNames=Os05g0318300 {ECO:0000313|EMBL:BAF17096.1};
GN   ORFNames=OSJNBb0059K16.5 {ECO:0000313|EMBL:AAV44116.1},
GN   OSNPB_050318300 {ECO:0000313|EMBL:BAS93341.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:AAV44116.1};
RN   [1] {ECO:0000313|EMBL:BAG97365.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N.,
RA   Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K.,
RA   Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K.,
RA   Shishiki T., Otomo Y., Murakami K., Iida Y., Sugano S., Fujimura T.,
RA   Suzuki Y., Tsunoda Y., Kurosaki T., Kodama T., Masuda H.,
RA   Kobayashi M., Xie Q., Lu M., Narikawa R., Sugiyama A., Mizuno K.,
RA   Yokomizo S., Niikura J., Ikeda R., Ishibiki J., Kawamata M.,
RA   Yoshimura A., Miura J., Kusumegi T., Oka M., Ryu R., Ueda M.,
RA   Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., Arakawa T.,
RA   Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., Ishii Y.,
RA   Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., Ota Y.,
RA   Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T.,
RA   Yoshino M., Hayashizaki Y.;
RT   "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from
RT   japonica Rice.";
RL   Science 301:376-379(2003).
RN   [2] {ECO:0000313|EMBL:AAV44116.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Chow T.-Y., Hsing Y.-I.C., Chen C.-S., Chen H.-H., Liu S.-M.,
RA   Chao Y.-T., Chang S.-J., Chen H.-C., Chen S.-K., Chen T.-R.,
RA   Chen Y.-L., Cheng C.-H., Chung C.-I., Han S.-Y., Hsiao S.-H.,
RA   Hsiung J.-N., Hsu C.-H., Huang J.-J., Kau P.-I., Lee M.-C., Leu H.-L.,
RA   Li Y.-F., Lin S.-J., Lin Y.-C., Wu S.-W., Yu C.-Y., Yu S.-W.,
RA   Wu H.-P., Shaw J.-F., Yu Y., Rambo T., Currie J., Collura K.,
RA   Soderlund C., Wing R.;
RT   "Oryza sativa BAC OSJNBb0059K16 genomic sequence.";
RL   Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:BAF17096.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4] {ECO:0000313|EMBL:BAF17096.1}
RP   NUCLEOTIDE SEQUENCE.
RG   IRGSP(International Rice Genome Sequencing Project);
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 5.";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:BAF17096.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RT   "The Second Rice Annotation Project Meeting (RAP2).";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:BAF17096.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16381971; DOI=10.1093/nar/gkj094;
RA   Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K.,
RA   Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K.,
RA   Itoh T., Gojobori T., Sasaki T.;
RT   "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa
RT   ssp. japonica genome information.";
RL   Nucleic Acids Res. 34:D741-D744(2006).
RN   [7] {ECO:0000313|EMBL:BAF17096.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B.,
RA   Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T.,
RA   Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B.,
RA   Harada E., Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S.,
RA   Hsing Y., Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P.,
RA   Kanno M., Kawahara Y., Kawamura T., Kawashima H., Khurana J.P.,
RA   Kikuchi S., Komatsu S., Koyanagi K.O., Kubooka H., Lieberherr D.,
RA   Lin Y.C., Lonsdale D., Matsumoto T., Matsuya A., McCombie W.R.,
RA   Messing J., Miyao A., Mulder N., Nagamura Y., Nam J., Namiki N.,
RA   Numa H., Nurimoto S., O'donovan C., Ohyanagi H., Okido T., Oota S.,
RA   Osato N., Palmer L.E., Quetier F., Raghuvanshi S., Saichi N.,
RA   Sakai H., Sakai Y., Sakata K., Sakurai T., Sato F., Sato Y.,
RA   Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K., Shinso Y.,
RA   Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T.,
RA   Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A.,
RA   Wang A., Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y.,
RA   Zhang H., Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.;
RT   "Curated Genome Annotation of Oryza sativa ssp. japonica and
RT   Comparative Genome Analysis with Arabidopsis thaliana.";
RL   Genome Res. 17:175-183(2007).
RN   [8] {ECO:0000313|EMBL:BAF17096.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y.,
RA   Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y.,
RA   Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H.,
RA   Matsuya A., Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y.,
RA   Suzuki M., Takeda J., Tanino M., Todokoro F., Yamaguchi K.,
RA   Yamamoto N., Yamasaki C., Imanishi T., Okido T., Tada M., Ikeo K.,
RA   Tateno Y., Gojobori T., Lin Y.C., Wei F.J., Hsing Y.I., Zhao Q.,
RA   Han B., Kramer M.R., McCombie R.W., Lonsdale D., O'Donovan C.C.,
RA   Whitfield E.J., Apweiler R., Koyanagi K.O., Khurana J.P.,
RA   Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G., Fujisawa M.,
RA   Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M.,
RA   Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H.,
RA   Sakai Y., Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A.,
RA   Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G.,
RA   Messing J., Christie K.R., Lieberherr D., Kim H., Zuccolo A.,
RA   Wing R.A., Nobuta K., Green P.J., Lu C., Meyers BC., Chaparro C.,
RA   Piegu B., Panaud O., Echeverria M.;
RT   "The Rice Annotation Project Database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [9] {ECO:0000313|EMBL:BAS93341.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23299411; DOI=10.1093/pcp/pcs183;
RA   Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y.,
RA   Wakimoto H., Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A.,
RA   Inokuchi H., Ikemura T., Matsumoto T., Sasaki T., Itoh T.;
RT   "Rice Annotation Project Database (RAP-DB): an integrative and
RT   interactive database for rice genomics.";
RL   Plant Cell Physiol. 54:E6-E6(2013).
RN   [10] {ECO:0000313|EMBL:BAS93341.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
RA   McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
RA   Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
RA   Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
RA   Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using
RT   next generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [11] {ECO:0000313|EMBL:BAS93341.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Gilbert D.G.;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AC134344; AAV44116.1; -; Genomic_DNA.
DR   EMBL; AP008211; BAF17096.1; -; Genomic_DNA.
DR   EMBL; AK105787; BAG97365.1; -; mRNA.
DR   EMBL; AP014961; BAS93341.1; -; Genomic_DNA.
DR   RefSeq; XP_015638109.1; XM_015782623.1.
DR   STRING; 4530.OS05T0318300-01; -.
DR   EnsemblPlants; Os05t0318300-01; Os05t0318300-01; Os05g0318300.
DR   GeneID; 4338401; -.
DR   Gramene; Os05t0318300-01; Os05t0318300-01; Os05g0318300.
DR   KEGG; osa:4338401; -.
DR   eggNOG; ENOG410IG34; Eukaryota.
DR   eggNOG; COG1939; LUCA.
DR   HOGENOM; HOG000218681; -.
DR   KO; K11145; -.
DR   OMA; NMEEYND; -.
DR   OrthoDB; 1261404at2759; -.
DR   Proteomes; UP000059680; Chromosome 5.
DR   GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd00593; RIBOc; 1.
DR   Gene3D; 1.10.1520.10; -; 1.
DR   InterPro; IPR000999; RNase_III_dom.
DR   InterPro; IPR036389; RNase_III_sf.
DR   Pfam; PF00636; Ribonuclease_3; 1.
DR   SUPFAM; SSF69065; SSF69065; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000059680};
KW   Reference proteome {ECO:0000313|Proteomes:UP000059680}.
FT   DOMAIN      101    200       RNase III. {ECO:0000259|Pfam:PF00636}.
FT   REGION       29     56       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS     34     53       Pro-rich. {ECO:0000256|SAM:MobiDB-lite}.
SQ   SEQUENCE   247 AA;  27778 MW;  C980A387FA9360CA CRC64;
     MATTAATTMV AAVHHPRPCF RVRAAWDMNP SASPKPKAKP PPPPPPPLPT APAPTHADLF
     ARHSNSEGQV PKKTTSMGFE RWWLPPPPEV KKPRSLYNAA SLAYLGDCIY ELYARRHFFF
     PPLSINDYNK RVMDVVKCES QDLLLNKLLG EDFLTQEERD ILRWGRNIVS SKTRTRKRAG
     IAVYNRASSL ETLIGYLYLT NFKRLEQLMF QLGFTSGASS HHIADELVSG FKKKNSTSVQ
     SQQQAAQ
//
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