ID Q5Z014_NOCFA Unreviewed; 532 AA.
AC Q5Z014;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=Putative DNA-binding protein {ECO:0000313|EMBL:BAD56227.1};
GN OrderedLocusNames=NFA_13820 {ECO:0000313|EMBL:BAD56227.1};
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Nocardia.
OX NCBI_TaxID=247156 {ECO:0000313|EMBL:BAD56227.1, ECO:0000313|Proteomes:UP000006820};
RN [1] {ECO:0000313|EMBL:BAD56227.1, ECO:0000313|Proteomes:UP000006820}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152 {ECO:0000313|EMBL:BAD56227.1,
RC ECO:0000313|Proteomes:UP000006820};
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
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DR EMBL; AP006618; BAD56227.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5Z014; -.
DR STRING; 247156.NFA_13820; -.
DR KEGG; nfa:NFA_13820; -.
DR eggNOG; COG1555; Bacteria.
DR HOGENOM; CLU_511743_0_0_11; -.
DR Proteomes; UP000006820; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 1.10.150.320; Photosystem II 12 kDa extrinsic protein; 1.
DR InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR019554; Soluble_ligand-bd.
DR PANTHER; PTHR21180; ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR21180:SF32; ENDONUCLEASE_EXONUCLEASE_PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF10531; SLBB; 1.
DR SMART; SM00278; HhH1; 2.
DR SUPFAM; SSF47781; RuvA domain 2-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:BAD56227.1};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006820};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 304..323
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 480..499
FT /note="Helix-hairpin-helix DNA-binding motif class 1"
FT /evidence="ECO:0000259|SMART:SM00278"
FT DOMAIN 510..529
FT /note="Helix-hairpin-helix DNA-binding motif class 1"
FT /evidence="ECO:0000259|SMART:SM00278"
FT REGION 62..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 347..370
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 445..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..117
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 133..147
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 532 AA; 54141 MW; 84F676EF99562DE3 CRC64;
MRATPGWLCT ARDWSTGALF SLVGAPARRA PRPSVAAMPR HDERERIRRR LGVLTERVGA
SRAAAIPPGR PAVVAHTGHR SPASTPHRSG RPGRSRAAAP ARWDRDDLPD NDLERDAEVP
LAGAFGEDEA RPGLVDTALR RSDTGDGRSG DGWIGDGRSG DGRVGDGRTG VGRIGDGRSG
DGRTGVGRTG VGRSGDGRSG DGRGSVAEAG SALDLGDDTG PPDPDRHGAP ARPEVRTSTA
RASSAARRDA AWGAAQAPAD IAADEFAEVD EPEWLREPQA PEPWTRRLVP ERFRGARVDP
GRRGAVTLVL VGVLAVLVTA FVLTRAQPVT HPVPPLASVR TTTAPPGVPV SGAARTQAAA
PGSVPVPETP PATGELVVSV VGLVHRGGLV RLPAGARVAD ALAAAGGPRD GADLTGLNLA
QRVQDGDQIL VGAAAPTGDG PRLGSATISA GGAGGAAGTT TGAPVPGTAG KIDLNTATEA
QLDALPGVGP VTARAILAWR TANGRFTAVD QLAEVDGIGP ARLARLRELV TV
//
