ID Q5ZJC9_CHICK Unreviewed; 762 AA.
AC Q5ZJC9; E1C4B3;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 27-MAR-2024, entry version 155.
DE RecName: Full=CCR4-NOT transcription complex subunit 4 {ECO:0008006|Google:ProtNLM};
GN ORFNames=RCJMB04_19d21 {ECO:0000313|EMBL:CAG32164.1};
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031 {ECO:0000313|EMBL:CAG32164.1};
RN [1] {ECO:0000313|EMBL:CAG32164.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CB {ECO:0000313|EMBL:CAG32164.1};
RC TISSUE=Bursa {ECO:0000313|EMBL:CAG32164.1};
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
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DR EMBL; AJ720505; CAG32164.1; -; mRNA.
DR RefSeq; NP_001012829.1; NM_001012811.1.
DR AlphaFoldDB; Q5ZJC9; -.
DR GeneID; 417936; -.
DR KEGG; gga:417936; -.
DR VEuPathDB; HostDB:geneid_417936; -.
DR eggNOG; KOG2068; Eukaryota.
DR HOGENOM; CLU_011836_0_0_1; -.
DR Bgee; ENSGALG00000011682; Expressed in testis and 12 other cell types or tissues.
DR ExpressionAtlas; Q5ZJC9; baseline and differential.
DR GO; GO:0030014; C:CCR4-NOT complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR CDD; cd16618; mRING-HC-C4C4_CNOT4; 1.
DR CDD; cd12438; RRM_CNOT4; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR034261; CNOT4_RRM.
DR InterPro; IPR039780; Mot2.
DR InterPro; IPR039515; NOT4_mRING-HC-C4C4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12603; CCR4-NOT TRANSCRIPTION COMPLEX RELATED; 1.
DR PANTHER; PTHR12603:SF0; CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF14570; zf-RING_4; 1.
DR SMART; SM00361; RRM_1; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 2: Evidence at transcript level;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
SQ SEQUENCE 762 AA; 83584 MW; 9F60D6A932953A21 CRC64;
MSRSPDAKED PVECPLCMEP LEIDDINFFP CTCGYQICRF CWHRIRTDEN GLCPACRKPY
PEDPAVYKPL SQEELQRIKN EKKQKQNERK QKISENRKHL ASVRVVQKNL VFVVGLSQRL
ADPEVLKRPE YFGKFGKIHK VVINNSTSYA GSQGPSASAY VTYIRSEDAL RAIQCVNNVV
VDGRTLKASL GTTKYCSYFL KNMQCPKPDC MYLHELGDEA ASFTKEEMQA GKHQEYEQKL
LQELYKLNPN FLQLSTGTVD KNKNKVTALQ RPNSNNKDAW PSLQSSSKSA NGLTMEHRKT
PPILENGTDS EHMTPDGADS DFGPIDKPSD SLSIGNGDSS QQITNSDTPS PPPGLTKPNP
VIPISSSNHS ARSPFEGAVT ESQSLFSDNF RHPNPIPSGL PPFPSSPQTS NDWPTAPEPQ
SLFTSETIPV SSSTDWQAAF GFGSSKQQED DLGFDPFDVT RKALADLIEK ELSVQDQPSL
SPTSLQNPSP HTTTAKGPGS GFLHPAAPTN ANSLSSTFPV MPQRFPQFQQ HRAVYNSFSF
PGQAARYPWM AFPRNSIMHL NHTANPTSNS NFLDLNLQPQ HSTGLGGIPI SDNSSSVESL
NMKEWQDGLR ALLPNINISF GGLPNASSPS NANHSVPTSN TATTDSLNWD SSGSWMDPAI
ITGIPASTGN SLDTLQDDNP PHWLKSLQAL TEVDGPSAAP SQTHHSNPFG TQIPLHRASW
NPYSPPSNPT SFHSPPPGFQ TAFRPPSKTP TDLLQSSALD RH
//
