ID Q6AFU9_LEIXX Unreviewed; 408 AA.
AC Q6AFU9;
DT 13-SEP-2004, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2004, sequence version 1.
DT 27-MAR-2024, entry version 99.
DE SubName: Full=Transcriptional regulator, NifR3/Smm1 family {ECO:0000313|EMBL:AAT88746.1};
GN Name=nifR3 {ECO:0000313|EMBL:AAT88746.1};
GN OrderedLocusNames=Lxx08490 {ECO:0000313|EMBL:AAT88746.1};
OS Leifsonia xyli subsp. xyli (strain CTCB07).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Leifsonia.
OX NCBI_TaxID=281090 {ECO:0000313|EMBL:AAT88746.1, ECO:0000313|Proteomes:UP000001306};
RN [1] {ECO:0000313|EMBL:AAT88746.1, ECO:0000313|Proteomes:UP000001306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CTCB07 {ECO:0000313|EMBL:AAT88746.1,
RC ECO:0000313|Proteomes:UP000001306};
RX PubMed=15305603;
RA Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P.,
RA Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D.,
RA de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R.,
RA Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H., Coutinho L.L.,
RA El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S.,
RA Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M.,
RA Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F.,
RA Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A.,
RA Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C.;
RT "The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli
RT subsp. xyli.";
RL Mol. Plant Microbe Interact. 17:827-836(2004).
CC -!- COFACTOR:
CC Name=FMN; Xref=ChEBI:CHEBI:58210;
CC Evidence={ECO:0000256|ARBA:ARBA00001917};
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DR EMBL; AE016822; AAT88746.1; -; Genomic_DNA.
DR AlphaFoldDB; Q6AFU9; -.
DR STRING; 281090.Lxx08490; -.
DR KEGG; lxx:Lxx08490; -.
DR eggNOG; COG0042; Bacteria.
DR HOGENOM; CLU_013299_0_0_11; -.
DR Proteomes; UP000001306; Chromosome.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
DR GO; GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.
DR CDD; cd02801; DUS_like_FMN; 1.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR035587; DUS-like_FMN-bd.
DR InterPro; IPR004652; DusB-like.
DR InterPro; IPR024036; tRNA-dHydroUridine_Synthase_C.
DR InterPro; IPR018517; tRNA_hU_synthase_CS.
DR NCBIfam; TIGR00737; nifR3_yhdG; 1.
DR PANTHER; PTHR45846; TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE; 1.
DR PANTHER; PTHR45846:SF1; TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE; 1.
DR Pfam; PF01207; Dus; 1.
DR SUPFAM; SSF51395; FMN-linked oxidoreductases; 1.
DR PROSITE; PS01136; UPF0034; 1.
PE 4: Predicted;
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW FMN {ECO:0000256|ARBA:ARBA00022643}; NADP {ECO:0000256|ARBA:ARBA00022857};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000001306};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 38..351
FT /note="DUS-like FMN-binding"
FT /evidence="ECO:0000259|Pfam:PF01207"
SQ SEQUENCE 408 AA; 43446 MW; D02EBE7F30A65CE6 CRC64;
MLTTTLTPRA TLRGDTPSAG TAAKLAIGPL ALDVPVVLAP MAGITNTAFR RLCREFGAGL
YVSEMITSRA LVERTPESLR LIAHHESETP RSIQLYGVDP KTVREAVTLL VAEDRADHID
LNFGCPVPKV TRKGGGAALP WKLGLFREIV EGAVAAAGDI PLTVKMRKGI DSDHLTYLEA
ARAAEGAGVA SIALHARTAA EFYSGHADWP AIRTLKETIT GTPVIGNGDI WSAADAVRMV
EETGCDGVVV GRGCLGRPWL FGDLAAAFKA RAGELSADEA AAAQAHPALG EVAATFRRHA
ELLVEFFDSE ERGCRDIRKH VAWYFKGYPV GGDLRASLAT VETLAHLDDL LATLDADQEY
PGAAAEGQRG RAGSPKRPAL PECWLKSREL DVEGRFELSE AEAHNSGG
//
