ID Q6J739_MEDTR Unreviewed; 856 AA.
AC Q6J739;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=AML1 {ECO:0000313|EMBL:AAT38998.1};
DE SubName: Full=Putative RNA recognition motif 2, nucleotide-binding alpha-beta plait domain-containing protein {ECO:0000313|EMBL:RHN66879.1};
DE SubName: Full=RNA recognition motif 2 in plant MEI2-like protein {ECO:0000313|EMBL:KEH33578.1};
GN Name=25490508 {ECO:0000313|EnsemblPlants:KEH33578};
GN OrderedLocusNames=MTR_3g448370 {ECO:0000313|EMBL:KEH33578.1};
GN ORFNames=MtrunA17_Chr3g0096561 {ECO:0000313|EMBL:RHN66879.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AAT38998.1};
RN [1] {ECO:0000313|EMBL:AAT38998.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=15356386; DOI=10.1023/B:PLAN.0000040819.33383.b6;
RA Anderson G.H., Alvarez N.D., Gilman C., Jeffares D.C., Trainor V.C.,
RA Hanson M.R., Veit B.;
RT "Diversification of genes encoding mei2 -like RNA binding proteins in
RT plants.";
RL Plant Mol. Biol. 54:653-670(2004).
RN [2] {ECO:0000313|EMBL:KEH33578.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH33578.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH33578,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [3] {ECO:0000313|EMBL:KEH33578.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH33578.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH33578,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [4] {ECO:0000313|EnsemblPlants:KEH33578}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH33578};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [5] {ECO:0000313|EMBL:RHN66879.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN66879.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY579881; AAT38998.1; -; mRNA.
DR EMBL; CM001219; KEH33578.1; -; Genomic_DNA.
DR EMBL; PSQE01000003; RHN66879.1; -; Genomic_DNA.
DR RefSeq; XP_013459547.1; XM_013604093.1.
DR AlphaFoldDB; Q6J739; -.
DR EnsemblPlants; KEH33578; KEH33578; MTR_3g448370.
DR GeneID; 25490508; -.
DR Gramene; KEH33578; KEH33578; MTR_3g448370.
DR KEGG; mtr:25490508; -.
DR OrthoDB; 446121at2759; -.
DR Proteomes; UP000002051; Chromosome 3.
DR Proteomes; UP000265566; Chromosome 3.
DR ExpressionAtlas; Q6J739; differential.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR CDD; cd12524; RRM1_MEI2_like; 1.
DR CDD; cd12529; RRM2_MEI2_like; 1.
DR CDD; cd12531; RRM3_MEI2_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR034453; MEI2-like_RRM1.
DR InterPro; IPR034454; MEI2-like_RRM3.
DR InterPro; IPR007201; Mei2-like_Rrm_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR23189:SF126; FI21126P1-RELATED; 1.
DR PANTHER; PTHR23189; RNA RECOGNITION MOTIF-CONTAINING; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF04059; RRM_2; 1.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 2: Evidence at transcript level;
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 198..271
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 283..356
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 522..567
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 836..856
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 522..546
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 856 AA; 93723 MW; 65E154251C68BA3B CRC64;
MDKLSGDSLP AHGAAGLSGI SSLNIPNKGG SSAWRIPHTT DIFHESNDVS LFSTSLPVLP
HEKLNLTDSE QDSEQSGQPV DDNLLTLGKV HKEDEGNDLF DDFETMLPDD EDELLAGIMD
DFDLRRLPNQ LEDLDENDLF VNGGGFEMDF EPQEGLSFGI SKMSISDGIA SNGIGPYAIP
NGVGTVAGEH PYGEHPSRTL FVRNINSNVE DSELRTLFEQ YGDIRTLYTA CKHRGFVMIS
YYDIRAARTA MRALQNKPLR RRKLDIHFSI PKDNPSEKDI NQGTLVVFNL DPSVSNDDLR
QIFGAYGEVK EIRETPHKRH HKFIEFYDVR AADAALKALN RSDIAGKRIK LEPSRPGGAR
RNLMQQLSQE LEQDEARTFR SQVGSPIANS PPGSWAHFGS PVDPNPLGSY SKSPGLGHAS
PTNHLSGLAA ILSPHTSTSP KIAPIGKDPG RVSNQMFTNS ANSGSTQGVA FQHSISFPEK
NVNVSPRPIS AFGESNSSSS SVGTLSGPQF LWGSPTPYSE NSNTSAWSSS SLGHPFTSSA
QRQGFPYTGH RNPFLGSQHH HHVGSAPSGL PLERNFRYFP ESPDASLMSP IGFGNSNRGD
GNFMMNMGSR SSAGHGIGLS ATTSEIGSPN FGMMSLPGHG SLFLGNSLYA GPGVSSIEGF
GERGRSRRPD NIVNQVESKK LYQLDLDKIV NGEDTRTTLM IKNIPNKYTS KMLLAAIDEN
HQGTYDFLYL PIDFKNKCNV GYAFINMVSP SHIVAFFKAF NGKKWEKFNS EKVASLAYAR
IQGKAALVMH FQNSSLMNED KRCRPILFHS EGQDTSDQEH FLSSNLNICI RQPDGSYSGD
MLESPKGNSD DNLERE
//
