ID Q6K8Z3_ORYSJ Unreviewed; 1185 AA.
AC Q6K8Z3;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 24-JAN-2024, entry version 131.
DE SubName: Full=Os02g0795000 protein {ECO:0000313|EMBL:BAS81352.1};
GN OrderedLocusNames=Os02g0795000 {ECO:0000313|EMBL:BAS81352.1};
GN ORFNames=OSNPB_020795000 {ECO:0000313|EMBL:BAS81352.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:BAS81352.1, ECO:0000313|Proteomes:UP000059680};
RN [1] {ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RA Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2] {ECO:0000313|EMBL:BAS81352.1, ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
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DR EMBL; AP014958; BAS81352.1; -; Genomic_DNA.
DR RefSeq; XP_015627621.1; XM_015772135.1.
DR AlphaFoldDB; Q6K8Z3; -.
DR SMR; Q6K8Z3; -.
DR STRING; 39947.Q6K8Z3; -.
DR PaxDb; 39947-Q6K8Z3; -.
DR EnsemblPlants; Os02t0795000-01; Os02t0795000-01; Os02g0795000.
DR GeneID; 4331000; -.
DR Gramene; Os02t0795000-01; Os02t0795000-01; Os02g0795000.
DR KEGG; osa:4331000; -.
DR eggNOG; KOG1865; Eukaryota.
DR HOGENOM; CLU_013307_0_0_1; -.
DR InParanoid; Q6K8Z3; -.
DR OMA; PAAFPIH; -.
DR OrthoDB; 227085at2759; -.
DR Proteomes; UP000059680; Chromosome 2.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IBA:GO_Central.
DR CDD; cd02661; Peptidase_C19E; 1.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR018200; USP_CS.
DR InterPro; IPR028889; USP_dom.
DR PANTHER; PTHR24006:SF784; OS02G0795000 PROTEIN; 1.
DR PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR Pfam; PF00443; UCH; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR PROSITE; PS00972; USP_1; 1.
DR PROSITE; PS00973; USP_2; 1.
DR PROSITE; PS50235; USP_3; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000059680}.
FT DOMAIN 86..390
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 441..472
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 480..499
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1007..1041
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1138..1185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 448..472
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 480..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1155..1185
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1185 AA; 129214 MW; DE6F2801500F1855 CRC64;
MMGEAEEGLM HRRIEFHAAR RPPRAVEGAG GRFWVEILSP DADKAAVVAA ARSEGLVRGL
EKGEGSGGGI DPELRVARMY LRRIGAGLQN FGNTCYLNSV LQCLTYTEPF VAYLQSGEHM
SSCRTIGFCA LCALQRHVNS ALQSTGKILR PVHIVRNLRC ISRSFRISRQ EDAHELMVSL
LESMHKCCLP SGVPSGSPSA YEKSLVHRIF GGLLRSQVRC TTCSHCSNKF DPFLDLSLEI
ANAATLVKAL QHFTAEELLD GGEKQYNCEH CRQKVVAKKR FMIEKAPSVL TIHLKRFSPF
NPRHKIDKKV QFQPTLNLKP YVSNPEGMEF KYSLYGVLVH AGWNTQSGHY YCFVRTSSGI
WHNLDDNKVY QVREADVLRQ KAYMLFYVRD RTRSSVMYSD NCTVNLSVNK MISEKITCMN
GSIKKDTVET KTLRVPSLVK EDVNLKKQNS ENGQSSNISN APQDQCSKSH SNTEVLEAAA
SPNNDPASTQ KASCIRPDTA AVNLPMKTEQ TAPDNRREIT SPAQADVSVL HNASFNQKLY
EKQLQEHQLE TDDALTDSRK DAPAALCTYG VGDGLLGRNG QSSEPHIGPC PAALPIHNGG
EGLLGANGQA SEAHSGPCSS AFPIHNGGEG LLGASGQSSE PHTGPCPAAL PIHDGGQGLL
GPNGQASEPH TDSCPAAFPI HSGGEGLLGA NGQASELHTD PCPAAFPIHS GGEGLLGANG
QASEPHTDPC PAAFPIHSAG EGLLGANGQD SEHRTGPIPA AFPVWNGTGV ILEKYGQVSG
PADPFCKPTP TISDTVSIAQ IIPTEHAAVS NGTVSSSDDL TGNTEANESS EFVKNYGEQV
MVRDLSAETS GDRANADEQT SMQNNTLEVG KDVAKDTDNV ANAEEQVLNH PLAEQVKSEK
QIYPGISTTL ICSEDTTQLI DKDTGSGKLN KKMNCKSKRQ VKYPAVRMFF GPKQLLLASV
KLHKKRKHKR SKKHHALSVH IESIITDQQT STSETVFSKI ISHKSRGQKR SCASASSEDG
TQLFNKKQHI EGTTNSVPMD NNDTKLASAD SNDAKLASAE LPSSCTNSLV NQTDSRNNVN
ANERGPWHFN LLTRGLREIT VPRWDDTEIK NTKETEILHP RTRSIGYVLD EWDEEYDRGK
RKKIRKPKHG FSGPNPFQET ANIRSRQRMR LQSDQTKSGN QPLRI
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