ID Q6LH07_PHOPR Unreviewed; 333 AA.
AC Q6LH07;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 114.
DE RecName: Full=Ribose operon repressor {ECO:0000256|ARBA:ARBA00044140};
GN Name=RBSR {ECO:0000313|EMBL:CAG23423.1};
GN OrderedLocusNames=PBPRB1561 {ECO:0000313|EMBL:CAG23423.1};
OS Photobacterium profundum (strain SS9).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Photobacterium.
OX NCBI_TaxID=298386 {ECO:0000313|EMBL:CAG23423.1, ECO:0000313|Proteomes:UP000000593};
RN [1] {ECO:0000313|Proteomes:UP000000593}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1253 / SS9 {ECO:0000313|Proteomes:UP000000593};
RX PubMed=15746425; DOI=10.1126/science.1103341;
RA Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M.,
RA Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C.,
RA Bartlett D.H., Valle G.;
RT "Life at depth: Photobacterium profundum genome sequence and expression
RT analysis.";
RL Science 307:1459-1461(2005).
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DR EMBL; CR378679; CAG23423.1; -; Genomic_DNA.
DR RefSeq; WP_011221581.1; NC_006371.1.
DR AlphaFoldDB; Q6LH07; -.
DR STRING; 298386.PBPRB1561; -.
DR KEGG; ppr:PBPRB1561; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_2_6; -.
DR Proteomes; UP000000593; Chromosome 2.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06275; PBP1_PurR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF144; RIBOSE OPERON REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000593};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 333 AA; 36838 MW; 9279AD4A00F71121 CRC64;
MATIKDVAKH VGVSTSTVSH VLNKTRFVSE DISTRVLAAV DELNYAPSAL ARSLKVKNTR
TFGMLVTTST NPFFGEVVKG VERRCYEYGY NLILCNTEGD IARMHSNLDT LLQKRVDGLL
LMCSEVDNEE FNLFARHQPV PTVVMDWGPI DFPSDKIQDN SHHGGYLATR HLIAQGHTQI
GCLTGPLDKL PAQQRLSGFV QAMEEAGLTI NKSWIASGNF ECEGGEKAFE ELYARGSLPT
ALFVCNDMMA MGVINTANKK GISVPNDISI VGYDDIKLAK YITPSLTTIH QPKHRLGQQA
VDTLLDKIQS QRETNLIIQL EPTLVERDSV KKM
//
