ID Q6N8V4_RHOPA Unreviewed; 495 AA.
AC Q6N8V4;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE RecName: Full=Type-4 uracil-DNA glycosylase {ECO:0000256|ARBA:ARBA00019403};
GN Name=ung {ECO:0000313|EMBL:CAE27240.1};
GN OrderedLocusNames=RPA1799 {ECO:0000313|EMBL:CAE27240.1};
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=258594 {ECO:0000313|EMBL:CAE27240.1, ECO:0000313|Proteomes:UP000001426};
RN [1] {ECO:0000313|EMBL:CAE27240.1, ECO:0000313|Proteomes:UP000001426}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009 {ECO:0000313|Proteomes:UP000001426};
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H.,
RA Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
CC -!- SIMILARITY: Belongs to the uracil-DNA glycosylase (UDG) superfamily.
CC Type 4 (UDGa) family. {ECO:0000256|ARBA:ARBA00006521}.
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DR EMBL; BX572598; CAE27240.1; -; Genomic_DNA.
DR RefSeq; WP_011157305.1; NZ_CP116810.1.
DR AlphaFoldDB; Q6N8V4; -.
DR STRING; 258594.RPA1799; -.
DR GeneID; 66892835; -.
DR eggNOG; COG1573; Bacteria.
DR HOGENOM; CLU_046101_1_0_5; -.
DR PhylomeDB; Q6N8V4; -.
DR Proteomes; UP000001426; Chromosome.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004844; F:uracil DNA N-glycosylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006281; P:DNA repair; IEA:UniProt.
DR CDD; cd10030; UDG-F4_TTUDGA_SPO1dp_like; 1.
DR Gene3D; 3.40.470.10; Uracil-DNA glycosylase-like domain; 1.
DR InterPro; IPR023875; DNA_repair_put.
DR InterPro; IPR025404; DUF4130.
DR InterPro; IPR005273; Ura-DNA_glyco_family4.
DR InterPro; IPR005122; Uracil-DNA_glycosylase-like.
DR InterPro; IPR036895; Uracil-DNA_glycosylase-like_sf.
DR NCBIfam; TIGR03915; SAM_7_link_chp; 1.
DR NCBIfam; TIGR00758; UDG_fam4; 1.
DR NCBIfam; TIGR03914; UDG_fam_dom; 1.
DR PANTHER; PTHR33693; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR PANTHER; PTHR33693:SF3; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR Pfam; PF13566; DUF4130; 1.
DR Pfam; PF03167; UDG; 1.
DR SMART; SM00986; UDG; 1.
DR SMART; SM00987; UreE_C; 1.
DR SUPFAM; SSF52141; Uracil-DNA glycosylase-like; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000001426}.
FT DOMAIN 323..483
FT /note="Uracil-DNA glycosylase-like"
FT /evidence="ECO:0000259|SMART:SM00986"
FT REGION 274..295
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 495 AA; 55537 MW; E3C834F66FE57CBE CRC64;
MNRIRLDSDT DFDGWRKAAR ELVLADVAPA DVTWTVAGDE PELFDVAGLA PHAGTFAEMA
APFIHPAQSP SPAQTFNVPA RFVELAHIAI LHRDPQRFAY LYQLLWRLRA NPELMQVATD
PDVARLQAMA KAVRRDEHKM HAFVRFREIG REPKSRYVAW FEPEHHIVEL AAPFFARRFA
DMEWSILTPD ACAHWDGHAI AITPGVSKAM APSEDRLEET WLTYYASIFN PARLKTRAMQ
AEMPKKYWRN LPEAALIKPL IEHAERKAHA MVAAEATAPR KPQRQEPPMT RAEPKADTLA
HLREEAKDCR ACDLWKDATQ TVFGEGPQHA TVMLVGEQPG DKEDLAGQPF VGPAGQMLDR
ALAEAGVDRS KTYVTNAVKH FKFVPRGKIR LHQKPATPEI KACRQWYERE LAAVQPLLVV
AMGATAAQSV LGRITPINKT RGHLIDRDDG PQVLVTVHPS YLLRLPDADA KAREYARFVE
DLKLIAAHLK KAHAA
//
