ID Q6NCI4_RHOPA Unreviewed; 220 AA.
AC Q6NCI4;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE SubName: Full=Possible CarD-like transcriptional regulator {ECO:0000313|EMBL:CAE25932.1};
GN OrderedLocusNames=RPA0488 {ECO:0000313|EMBL:CAE25932.1};
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=258594 {ECO:0000313|EMBL:CAE25932.1, ECO:0000313|Proteomes:UP000001426};
RN [1] {ECO:0000313|EMBL:CAE25932.1, ECO:0000313|Proteomes:UP000001426}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009 {ECO:0000313|Proteomes:UP000001426};
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H.,
RA Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
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DR EMBL; BX572594; CAE25932.1; -; Genomic_DNA.
DR AlphaFoldDB; Q6NCI4; -.
DR STRING; 258594.RPA0488; -.
DR eggNOG; COG1329; Bacteria.
DR HOGENOM; CLU_048259_1_0_5; -.
DR PhylomeDB; Q6NCI4; -.
DR Proteomes; UP000001426; Chromosome.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 1.20.58.1290; CarD-like, C-terminal domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR042215; CarD-like_C.
DR InterPro; IPR048792; CarD_C.
DR PANTHER; PTHR38447:SF1; RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR CARD; 1.
DR PANTHER; PTHR38447; TRANSCRIPTION FACTOR YDEB-RELATED; 1.
DR Pfam; PF21095; CarD_C; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001426}.
FT DOMAIN 30..140
FT /note="CarD-like/TRCF RNAP-interacting"
FT /evidence="ECO:0000259|SMART:SM01058"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 179..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..201
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..220
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 220 AA; 24183 MW; C48D35E17E7973E0 CRC64;
MKQPVAAAKP AAPAPARVEE PKKAVTQRQG FKANEFVVYP AHGVGQILAI EEQEIAGAKL
ELFVINFIKD KMTLRVPTAK VGNVGMRKLS DPALVKKALE TLKGRARVKR TMWSRRAQEY
EAKINSGDIV AIAEVVRDLY RSESQPEQSY SERQLYEAAL DRLSREIAVV QHITETEAVK
EVESQLAKSP RRGAKAEAEA EADADLDGDS DDEAVTDEAA
//
