ID Q729V2_DESVH Unreviewed; 723 AA.
AC Q729V2;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 115.
DE SubName: Full=S1 RNA binding domain protein {ECO:0000313|EMBL:AAS96719.1};
GN OrderedLocusNames=DVU_2246 {ECO:0000313|EMBL:AAS96719.1};
OS Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM
OS B-1760 / Hildenborough).
OC Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales;
OC Desulfovibrionaceae; Nitratidesulfovibrio.
OX NCBI_TaxID=882 {ECO:0000313|EMBL:AAS96719.1, ECO:0000313|Proteomes:UP000002194};
RN [1] {ECO:0000313|EMBL:AAS96719.1, ECO:0000313|Proteomes:UP000002194}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough
RC {ECO:0000313|Proteomes:UP000002194};
RX PubMed=15077118; DOI=10.1038/nbt959;
RA Heidelberg J.F., Seshadri R., Haveman S.A., Hemme C.L., Paulsen I.T.,
RA Kolonay J.F., Eisen J.A., Ward N., Methe B., Brinkac L.M., Daugherty S.C.,
RA Deboy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C.,
RA Sullivan S.A., Fouts D., Haft D.H., Selengut J., Peterson J.D.,
RA Davidsen T.M., Zafar N., Zhou L., Radune D., Dimitrov G., Hance M.,
RA Tran K., Khouri H., Gill J., Utterback T.R., Feldblyum T.V., Wall J.D.,
RA Voordouw G., Fraser C.M.;
RT "The genome sequence of the anaerobic, sulfate-reducing bacterium
RT Desulfovibrio vulgaris Hildenborough.";
RL Nat. Biotechnol. 22:554-559(2004).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AE017285; AAS96719.1; -; Genomic_DNA.
DR RefSeq; WP_010939521.1; NC_002937.3.
DR RefSeq; YP_011459.1; NC_002937.3.
DR AlphaFoldDB; Q729V2; -.
DR SMR; Q729V2; -.
DR STRING; 882.DVU_2246; -.
DR PaxDb; 882-DVU_2246; -.
DR EnsemblBacteria; AAS96719; AAS96719; DVU_2246.
DR KEGG; dvu:DVU_2246; -.
DR PATRIC; fig|882.5.peg.2042; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_7; -.
DR OrthoDB; 9804714at2; -.
DR PhylomeDB; Q729V2; -.
DR Proteomes; UP000002194; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002194}.
FT DOMAIN 648..717
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 723 AA; 78434 MW; 7EA3A39C0B84573F CRC64;
MTETIPHDSV AHRLAADLGI TTAQASAALK LFDEGGTIPF VARYRKEATG GLDEVALTAL
RDGCERLRTL DKRRDAIIAS MTEREQLTPD LAKALHAATT LTALEDIYLP FRPKRVTRAA
KARERGLAPL AERLLEQRGA QAGQLAAPFV DEAKGVPDTA AALAGARDII AETVSEDRAT
RATLRDIFVR RATLRSKVAR GKEEQAATYR DHFDRSEHAA AAPAHRLLAM FRGEREELLD
VRVRPDDDIA VGALHRRWLK GRASSAGTDA AEVATALTDA WNRLLAPSLE NEFRTALRER
AEAEAIAVFA ANLRELLLAP PMGPRRTLAL DPGWRTGAKL VCLDAQGALL HHEVIHPLTG
GDRATRAAAT LRELCTRHGI EAVAVGNGTA GRETEAFVKS AGLPPHVTVA LVDERGASVY
SASEVARAEF PDHDVTVRGA ISIGRRLMDP LAELVKVDPR SLGVGQYQHD VDQNALRRAL
EEVVASCVNA VGVDVNTASP ELLAYVSGIG PALAKGIVAL RAVNGPFRTR RDLLKVPRLG
PKAFEQAAGF LRVHGGPEPL DASAVHPESY AVVRRMAEDT GCSVPDLMRD ATRREALRLE
RYVDDRVGLP TLRDIMSELA RPGRDPRPAF EVFAFAEGVN KVDDVQPGME LPGIVTNVTK
FGAFVDIGVH RDGLVHVSQL ADRFVRDPAE VVAPGRKVRV RVLDVDRQRE RINLTLKGVP
QQD
//
