ID Q7G8T1_ARATH Unreviewed; 398 AA.
AC Q7G8T1; A0A178V8M6;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 164.
DE SubName: Full=C2H2-type zinc finger family protein {ECO:0000313|EMBL:AEE74911.1};
DE SubName: Full=F18K10.4 protein {ECO:0000313|EMBL:AAF76348.1};
GN Name=F18K10.4 {ECO:0000313|EMBL:AAF76348.1};
GN Synonyms=F13M14.25 {ECO:0000313|EMBL:AAG51397.1};
GN OrderedLocusNames=At3g10470 {ECO:0000313|Araport:AT3G10470,
GN ECO:0000313|EMBL:AEE74911.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAF76348.1};
RN [1] {ECO:0000313|EMBL:AAG51397.1}
RP NUCLEOTIDE SEQUENCE.
RA Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D.,
RA Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E.,
RA Bowman C.L., White O., Nierman W.C., Fraser C.M.;
RT "Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence.";
RL Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AEE74911.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130713; DOI=10.1038/35048706;
RG European Union Chromosome 3 Arabidopsis Sequencing Consortium;
RG Institute for Genomic Research;
RG Kazusa DNA Research Institute;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M.,
RA Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N.,
RA Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L.,
RA Weissenbach J., Saurin W., Quetier F., Schafer M., Muller-Auer S.,
RA Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N.,
RA Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P.,
RA Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S.,
RA Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwalder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S.,
RA Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3] {ECO:0000313|EMBL:AAF76348.1}
RP NUCLEOTIDE SEQUENCE.
RA Lin X., Kaul S., Town C.D., Benito M.-I., Creasy T.H., Haas B.,
RA Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E.,
RA Bowman C.L., White O., Nierman W.C., Fraser C.M.;
RT "Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence.";
RL Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AAG51397.1}
RP NUCLEOTIDE SEQUENCE.
RA Town C.D., Kaul S.;
RL Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:BAH30446.1}
RP NUCLEOTIDE SEQUENCE.
RA Fujita M.;
RT "ORF Cloning and Analysis of Arabidopsis Transcription Factor Genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:AEE74911.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|EMBL:AEE74911.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [8] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC013428; AAF76348.1; -; Genomic_DNA.
DR EMBL; AC011560; AAG51397.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74911.1; -; Genomic_DNA.
DR EMBL; AB493608; BAH30446.1; -; mRNA.
DR RefSeq; NP_187658.1; NM_111882.5.
DR AlphaFoldDB; Q7G8T1; -.
DR IntAct; Q7G8T1; 1.
DR STRING; 3702.Q7G8T1; -.
DR PaxDb; 3702-AT3G10470-1; -.
DR ProteomicsDB; 189252; -.
DR EnsemblPlants; AT3G10470.1; AT3G10470.1; AT3G10470.
DR GeneID; 820211; -.
DR Gramene; AT3G10470.1; AT3G10470.1; AT3G10470.
DR KEGG; ath:AT3G10470; -.
DR Araport; AT3G10470; -.
DR TAIR; AT3G10470; -.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_059471_0_0_1; -.
DR OMA; FASKQEH; -.
DR OrthoDB; 677909at2759; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q7G8T1; baseline and differential.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0009555; P:pollen development; IMP:TAIR.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; TAS:TAIR.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR26374:SF454; C2H2-TYPE ZINC FINGER FAMILY PROTEIN; 1.
DR PANTHER; PTHR26374; ZINC FINGER PROTEIN ZAT5; 1.
DR Pfam; PF13912; zf-C2H2_6; 2.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q7G8T1,
KW ECO:0007829|ProteomicsDB:Q7G8T1};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Zinc {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 182..209
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 261..285
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 1..96
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 359..391
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 43..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..96
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 363..383
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 398 AA; 42993 MW; 378A3523122308D5 CRC64;
MEAAAEAVSA AREQSLILKG KRTKRQRPQS PIPFSIIPPM SSHEPDAEEE STSLVSKEKS
LNDEINNNNI KNNNNTLING VTSSSSASSS SNNNATLKAT ADEEDQDMAN CLILLAQGHS
LPHLQPQPHP QQQTRQLMMS YQDSGNNNNN AYRSSSRRFL ETSSSNGTTT NGGGGRAGYY
VYQCKTCDRT FPSFQALGGH RASHKKPKAA MGLHSNHDHK KSNYDDAVSL HLNNVLTTTP
NNNSNHRSLV VYGKGSNNKV HECGICGAEF TSGQALGGHM RRHRGAVVAA AAASTATVSV
AAIPATANTA LSLSPMSFDQ MSEGPIQAPV KRARSAVVSL DLDLNLPAPE DENRVNGLSF
ASKQEHEQEH EQTQQKKQRE EQKSLVLSSA PTLVDCHY
//
