GenomeNet

Database: UniProt
Entry: Q7U6F4
LinkDB: Q7U6F4
Original site: Q7U6F4 
ID   RIMK_SYNPX              Reviewed;         466 AA.
AC   Q7U6F4;
DT   20-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2003, sequence version 1.
DT   16-JAN-2019, entry version 86.
DE   RecName: Full=Probable alpha-L-glutamate ligase;
DE            EC=6.3.2.-;
GN   Name=rimK; OrderedLocusNames=SYNW1384;
OS   Synechococcus sp. (strain WH8102).
OC   Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae;
OC   Synechococcus.
OX   NCBI_TaxID=84588;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WH8102;
RX   PubMed=12917641; DOI=10.1038/nature01943;
RA   Palenik B., Brahamsha B., Larimer F.W., Land M.L., Hauser L.,
RA   Chain P., Lamerdin J.E., Regala W., Allen E.E., McCarren J.,
RA   Paulsen I.T., Dufresne A., Partensky F., Webb E.A., Waterbury J.;
RT   "The genome of a motile marine Synechococcus.";
RL   Nature 424:1037-1042(2003).
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC       Note=Binds 2 magnesium or manganese ions per subunit.
CC       {ECO:0000250};
CC   -!- SIMILARITY: In the C-terminal section; belongs to the RimK family.
CC       {ECO:0000305}.
DR   EMBL; BX569692; CAE07899.1; -; Genomic_DNA.
DR   RefSeq; WP_011128248.1; NC_005070.1.
DR   ProteinModelPortal; Q7U6F4; -.
DR   SMR; Q7U6F4; -.
DR   STRING; 84588.SYNW1384; -.
DR   PRIDE; Q7U6F4; -.
DR   EnsemblBacteria; CAE07899; CAE07899; SYNW1384.
DR   KEGG; syw:SYNW1384; -.
DR   eggNOG; ENOG4105D9I; Bacteria.
DR   eggNOG; COG0189; LUCA.
DR   eggNOG; COG4067; LUCA.
DR   HOGENOM; HOG000293092; -.
DR   KO; K05844; -.
DR   OMA; TNILVQE; -.
DR   OrthoDB; 359914at2; -.
DR   Proteomes; UP000001422; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006464; P:cellular protein modification process; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-KW.
DR   Gene3D; 2.40.70.10; -; 1.
DR   Gene3D; 3.30.1490.20; -; 1.
DR   InterPro; IPR011761; ATP-grasp.
DR   InterPro; IPR013651; ATP-grasp_RimK-type.
DR   InterPro; IPR013815; ATP_grasp_subdomain_1.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR004666; RpS6_RimK/Lys_biosynth_LsyX.
DR   Pfam; PF08443; RimK; 1.
DR   SUPFAM; SSF50630; SSF50630; 1.
DR   TIGRFAMs; TIGR00768; rimK_fam; 1.
DR   PROSITE; PS50975; ATP_GRASP; 1.
PE   3: Inferred from homology;
KW   ATP-binding; Complete proteome; Ligase; Magnesium; Manganese;
KW   Metal-binding; Nucleotide-binding; Protein biosynthesis.
FT   CHAIN         1    466       Probable alpha-L-glutamate ligase.
FT                                /FTId=PRO_0000205486.
FT   DOMAIN      266    449       ATP-grasp. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00409}.
FT   NP_BIND     340    341       ATP. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00409}.
FT   NP_BIND     373    375       ATP. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00409}.
FT   REGION        1    161       Unknown.
FT   REGION      162    466       Alpha-L-glutamate ligase.
FT   METAL       410    410       Magnesium or manganese 1.
FT                                {ECO:0000255|PROSITE-ProRule:PRU00409}.
FT   METAL       422    422       Magnesium or manganese 1.
FT                                {ECO:0000255|PROSITE-ProRule:PRU00409}.
FT   METAL       422    422       Magnesium or manganese 2.
FT                                {ECO:0000255|PROSITE-ProRule:PRU00409}.
FT   METAL       424    424       Magnesium or manganese 2.
FT                                {ECO:0000255|PROSITE-ProRule:PRU00409}.
FT   BINDING     303    303       ATP. {ECO:0000250}.
FT   BINDING     349    349       ATP. {ECO:0000250}.
SQ   SEQUENCE   466 AA;  51437 MW;  BF810994693F0CE8 CRC64;
     MTRKIIVGSE EWCSLPGLGL PAIKARVDSG AATSSLHAFN IVPFQRDEAR WISFEVHPLQ
     NDRSVVIRRE SPVLEQRGVR NTSGITETRY VIREQLVLGE ESWPIELTLT NRDAMGYRML
     LGREAMVGRV LVDPEGSHQL GDLRQDQLEA MYAPLRTERN GLRIALLASD PELYSNRRLL
     EAGEERGHRM EFLNVKQCYM RLDPQNPEMH YRGGNVLERI NAVIPRIRPS VTFYGCAITR
     QFEAMGISVL NAAEPIKRSR DKLLASQLFV RHGLNMPVTG FASSPLDTKD LIKMVGGAPL
     ILKLLEGAQG RGVVLAETQK AAESVINAMK SLNANLLVQE FIKEAGGKDL RCFVIGGKVV
     SAIERTAAVG DFRSNIHQGG SAQAVRIRPE ERKLAVSATR ALGLDVAGVD IIRSERGPLL
     LEVNSSPGLE GIETATGKDL AGLMIQEIER KLGWVRTRLS EPQVAC
//
DBGET integrated database retrieval system