ID Q7UUI8_RHOBA Unreviewed; 321 AA.
AC Q7UUI8;
DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2003, sequence version 1.
DT 28-JUN-2023, entry version 110.
DE SubName: Full=Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CAD73091.1};
DE EC=4.2.1.70 {ECO:0000313|EMBL:CAD73091.1};
GN Name=rluD {ECO:0000313|EMBL:CAD73091.1};
GN OrderedLocusNames=RB3266 {ECO:0000313|EMBL:CAD73091.1};
OS Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1).
OC Bacteria; Planctomycetota; Planctomycetia; Pirellulales; Pirellulaceae;
OC Rhodopirellula.
OX NCBI_TaxID=243090 {ECO:0000313|EMBL:CAD73091.1, ECO:0000313|Proteomes:UP000001025};
RN [1] {ECO:0000313|EMBL:CAD73091.1, ECO:0000313|Proteomes:UP000001025}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 10527 / NCIMB 13988 / SH1
RC {ECO:0000313|Proteomes:UP000001025};
RX PubMed=12835416; DOI=10.1073/pnas.1431443100;
RA Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W.,
RA Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R.,
RA Reinhardt R.;
RT "Complete genome sequence of the marine planctomycete Pirellula sp. strain
RT 1.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003).
CC -!- SIMILARITY: Belongs to the pseudouridine synthase RluA family.
CC {ECO:0000256|ARBA:ARBA00010876}.
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DR EMBL; BX294138; CAD73091.1; -; Genomic_DNA.
DR RefSeq; NP_865407.1; NC_005027.1.
DR RefSeq; WP_011119269.1; NC_005027.1.
DR AlphaFoldDB; Q7UUI8; -.
DR STRING; 243090.RB3266; -.
DR EnsemblBacteria; CAD73091; CAD73091; RB3266.
DR KEGG; rba:RB3266; -.
DR PATRIC; fig|243090.15.peg.1505; -.
DR eggNOG; COG0522; Bacteria.
DR eggNOG; COG0564; Bacteria.
DR HOGENOM; CLU_016902_8_5_0; -.
DR InParanoid; Q7UUI8; -.
DR OMA; PKTHVYR; -.
DR OrthoDB; 9784108at2; -.
DR Proteomes; UP000001025; Chromosome.
DR GO; GO:0009982; F:pseudouridine synthase activity; IBA:GO_Central.
DR GO; GO:0004730; F:pseudouridylate synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProt.
DR GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IBA:GO_Central.
DR CDD; cd02869; PseudoU_synth_RluA_like; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.30.2350.10; Pseudouridine synthase; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006224; PsdUridine_synth_RluA-like_CS.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR21600; MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE; 1.
DR PANTHER; PTHR21600:SF44; RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D; 1.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR PROSITE; PS01129; PSI_RLU; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000313|EMBL:CAD73091.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001025};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT DOMAIN 16..80
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
SQ SEQUENCE 321 AA; 36186 MW; B03024A7D71EB864 CRC64;
MPLTSVSTTV DETNEGRVDI IVRELSETSR SQARGMIDHG CVMINGSPCK SVGTTVKPGD
LVAVRYDKHQ RYREKKRQWD DRTFEIVFED EHIIVVNKSA GTLTVPTDRG EPNSLVDRVS
IYLSYSKSKK EAFVVHRLDR ETSGLLVFGK HEPIADLLIE QFKDRRPTRV FHAIVAGNVS
EDEGTFESHL ATGSNLDRYE TRPGKDTDQA ITHYKVVRRL AERESSHGEE TTLIEAQLET
SKRNQVRVQF ANAGHPVLGD PRYKPKEATH ARWHRKRMAL HASTLGFFHP VSGEPVNFDT
PLPSAMEKFV AGARGRSDRK A
//