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Database: UniProt
Entry: Q7UUI8_RHOBA
LinkDB: Q7UUI8_RHOBA
Original site: Q7UUI8_RHOBA 
ID   Q7UUI8_RHOBA            Unreviewed;       321 AA.
AC   Q7UUI8;
DT   01-OCT-2003, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2003, sequence version 1.
DT   28-JUN-2023, entry version 110.
DE   SubName: Full=Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CAD73091.1};
DE            EC=4.2.1.70 {ECO:0000313|EMBL:CAD73091.1};
GN   Name=rluD {ECO:0000313|EMBL:CAD73091.1};
GN   OrderedLocusNames=RB3266 {ECO:0000313|EMBL:CAD73091.1};
OS   Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1).
OC   Bacteria; Planctomycetota; Planctomycetia; Pirellulales; Pirellulaceae;
OC   Rhodopirellula.
OX   NCBI_TaxID=243090 {ECO:0000313|EMBL:CAD73091.1, ECO:0000313|Proteomes:UP000001025};
RN   [1] {ECO:0000313|EMBL:CAD73091.1, ECO:0000313|Proteomes:UP000001025}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 10527 / NCIMB 13988 / SH1
RC   {ECO:0000313|Proteomes:UP000001025};
RX   PubMed=12835416; DOI=10.1073/pnas.1431443100;
RA   Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W.,
RA   Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R.,
RA   Reinhardt R.;
RT   "Complete genome sequence of the marine planctomycete Pirellula sp. strain
RT   1.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003).
CC   -!- SIMILARITY: Belongs to the pseudouridine synthase RluA family.
CC       {ECO:0000256|ARBA:ARBA00010876}.
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DR   EMBL; BX294138; CAD73091.1; -; Genomic_DNA.
DR   RefSeq; NP_865407.1; NC_005027.1.
DR   RefSeq; WP_011119269.1; NC_005027.1.
DR   AlphaFoldDB; Q7UUI8; -.
DR   STRING; 243090.RB3266; -.
DR   EnsemblBacteria; CAD73091; CAD73091; RB3266.
DR   KEGG; rba:RB3266; -.
DR   PATRIC; fig|243090.15.peg.1505; -.
DR   eggNOG; COG0522; Bacteria.
DR   eggNOG; COG0564; Bacteria.
DR   HOGENOM; CLU_016902_8_5_0; -.
DR   InParanoid; Q7UUI8; -.
DR   OMA; PKTHVYR; -.
DR   OrthoDB; 9784108at2; -.
DR   Proteomes; UP000001025; Chromosome.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IBA:GO_Central.
DR   GO; GO:0004730; F:pseudouridylate synthase activity; IEA:UniProtKB-EC.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProt.
DR   GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IBA:GO_Central.
DR   CDD; cd02869; PseudoU_synth_RluA_like; 1.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.30.2350.10; Pseudouridine synthase; 1.
DR   Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR   InterPro; IPR006224; PsdUridine_synth_RluA-like_CS.
DR   InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   PANTHER; PTHR21600; MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE; 1.
DR   PANTHER; PTHR21600:SF44; RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D; 1.
DR   Pfam; PF00849; PseudoU_synth_2; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR   SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR   PROSITE; PS01129; PSI_RLU; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
KW   Lyase {ECO:0000313|EMBL:CAD73091.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001025};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT   DOMAIN          16..80
FT                   /note="RNA-binding S4"
FT                   /evidence="ECO:0000259|SMART:SM00363"
SQ   SEQUENCE   321 AA;  36186 MW;  B03024A7D71EB864 CRC64;
     MPLTSVSTTV DETNEGRVDI IVRELSETSR SQARGMIDHG CVMINGSPCK SVGTTVKPGD
     LVAVRYDKHQ RYREKKRQWD DRTFEIVFED EHIIVVNKSA GTLTVPTDRG EPNSLVDRVS
     IYLSYSKSKK EAFVVHRLDR ETSGLLVFGK HEPIADLLIE QFKDRRPTRV FHAIVAGNVS
     EDEGTFESHL ATGSNLDRYE TRPGKDTDQA ITHYKVVRRL AERESSHGEE TTLIEAQLET
     SKRNQVRVQF ANAGHPVLGD PRYKPKEATH ARWHRKRMAL HASTLGFFHP VSGEPVNFDT
     PLPSAMEKFV AGARGRSDRK A
//
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