ID Q84NB4_ARATH Unreviewed; 185 AA.
AC Q84NB4;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 149.
DE SubName: Full=At5g65060 {ECO:0000313|EMBL:ABF83648.1};
DE SubName: Full=K-box region and MADS-box transcription factor family protein {ECO:0000313|EMBL:AED97994.1};
DE SubName: Full=MADS affecting flowering 3 variant II {ECO:0000313|EMBL:AAO65311.1};
GN Name=MAF3 {ECO:0000313|EMBL:AAO65311.1, ECO:0000313|TAIR:AT5G65060};
GN Synonyms=AGAMOUS-like 70 {ECO:0000313|EMBL:AED97994.1}, AGL70
GN {ECO:0000313|EMBL:AED97994.1}, FCL3 {ECO:0000313|EMBL:AED97994.1},
GN MADS AFFECTING FLOWERING 3 {ECO:0000313|EMBL:AED97994.1};
GN OrderedLocusNames=At5g65060 {ECO:0000313|Araport:AT5G65060,
GN ECO:0000313|EMBL:AED97994.1};
GN ORFNames=F15O5.2 {ECO:0000313|EMBL:AED97994.1}, F15O5_2
GN {ECO:0000313|EMBL:AED97994.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAO65311.1};
RN [1] {ECO:0000313|EMBL:AED97994.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2] {ECO:0000313|EMBL:AAO65311.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=12724541; DOI=10.1105/tpc.009506;
RA Ratcliffe O.J., Kumimoto R.W., Wong B.J., Riechmann J.L.;
RT "Analysis of the Arabidopsis MADS AFFECTING FLOWERING gene family: MAF2
RT prevents vernalization by short periods of cold.";
RL Plant Cell 15:1159-1169(2003).
RN [3] {ECO:0000313|EMBL:ABF83648.1}
RP NUCLEOTIDE SEQUENCE.
RA Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AED97994.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AED97994.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AY231446; AAO65311.1; -; mRNA.
DR EMBL; BT025758; ABF83648.1; -; mRNA.
DR EMBL; CP002688; AED97994.1; -; Genomic_DNA.
DR RefSeq; NP_001032144.1; NM_001037067.1.
DR AlphaFoldDB; Q84NB4; -.
DR SMR; Q84NB4; -.
DR EnsemblPlants; AT5G65060.2; AT5G65060.2; AT5G65060.
DR GeneID; 836630; -.
DR Gramene; AT5G65060.2; AT5G65060.2; AT5G65060.
DR Araport; AT5G65060; -.
DR TAIR; AT5G65060; MAF3.
DR HOGENOM; CLU_053053_0_4_1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q84NB4; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0009909; P:regulation of flower development; IEA:UniProt.
DR GO; GO:0009628; P:response to abiotic stimulus; IEA:UniProt.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF181; (RAPE) HYPOTHETICAL PROTEIN; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
FT DOMAIN 66..159
FT /note="K-box"
FT /evidence="ECO:0000259|PROSITE:PS51297"
SQ SEQUENCE 185 AA; 20914 MW; FD1E841D090F3B0F CRC64;
MGRRKVEIKR IENKSSRQVT FSKRRKGLIE KARQLSILCE SSIAVVAVSG SGKLYDSASG
DNMSKIIDRY EIHHADELKA LDLAEKIRNY LPHKELLEIV QSVDSLISME EQLETALSVI
RAKKTELMME DMKSLQEREK LLIEENQILA SQVGKKTFLV IEGDRGMSRE NGSGNKVPET
LSLLK
//
